Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0838 |
Symbol | |
ID | 4896812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 851532 |
End bp | 854972 |
Gene Length | 3441 bp |
Protein Length | 1146 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640111423 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001042721 |
Protein GI | 126461607 |
COG category | [C] Energy production and conversion |
COG ID | [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCG CCGCTGTCCA TCCCACCTCT TCCGACACTC TCGACGAGGC GGGCCTTGTG GCGCGCCTGA TCGCCGAGGC CGATCTCGAC CCGTCCGCCC GTGCGCGCAT CGTGGCCCGC GGGGCGGATC TCGTCCGCCG CATCCGTCAG GGATCGCGGC CCGGGCTGAT GGAGGGCTTT CTTGCGGAAT ACGGCCTCTC GACCGACGAG GGGATCGCGC TCATGTGCCT CGCCGAGGCG CTGCTGCGGG TGCCGGATGC CGAGACGATG GACGCGCTGA TCGAGGACAA GATCGCGCCC TCGGACTGGA ACCGGCATCT GGGGCGGTCG GCCTCGAGCC TTGTGAACGC CTCGACCTGG GCGCTGATGC TGACGGGCAA GGTGCTCGAC GACCGCGAGC CGGGCGTGGC GGGCCATCTG CGCGGCCTCG TGCGGCGGCT GGGCGAGCCG GTGATCCGCA AGGCCGTGGC CCGCGCCATG AAGGAGATGG GCCGCCAGTT CGTGCTGGGC GAGACCATCG AGGGCGCGAT GGAGCGCGCG GCCGAGCTCG AGGCCAAAGG CTACAGCTAC AGCTACGACA TGCTGGGCGA GGCCGCCCGC ACCGAGGCCG ACGCGCGGCG CTATCATCTG GCCTATTCGC GCGCCATCAC CGCCATCGCG GCGGCGGCGA AGAGCCGGGA CATCCGCGAC AATCCGGGGA TCTCGGTCAA GCTTTCGGCG CTGCATCCGC GCTACGAGGT GGCCAAGCGC GCCCGCGTGC TGGCCGAGCT CGTGCCGCGC GTGACGGCGC TGGCGGGGCT CGCGCGGGCG GCGGGCCTCG GCTTCAACAT CGACGCCGAG GAGGCCGACC GGCTCGATCT CTCGCTCGAG GTGATCGCGG CCGCGCTGGC CGAGCCGTCG CTGGCGGGCT GGGACGGGTT CGGCGTGGTG GTGCAGGCCT ACGGCCGCCG CGCGGGCGAG GTGCTGGACC GGCTCTATGG CATGGCCGTG CGGCTCGACC GCAAGCTGAT GGTGCGGCTC GTGAAGGGCG CCTACTGGGA CGGCGAGGTG AAGCGGGCGC AGGTGCTGGG TCTGGCCGAC TTCCCGGTCT TCACCCGCAA GATGGCGACG GATGTGAGCT ACATCGCGCA GGCCCGCAAG CTCTTCTCCA TGTCCGACCG GATCTATCCG CAGTTCGCCA CCCACAATGC CCATACGGTC GCCGCGATCC TCGAACTGGC CGAGGGGCGC CCGTTCGAGT TCCAGCGCCT GCACGGCATG GGCGAGCGGC TGCATGACCT CGTGCTGACC GAAGAGAAGA CGCGCTGCCG GATCTATGCG CCGGTGGGCG CGCACCGCGA TCTTCTGGCC TATCTGGTGC GCCGCCTGCT CGAGAACGGC GCCAATTCGA GCTTCGTGAA CCAGATCGTC GATGAGAGCG TGAGCCCCGA GGCGGTGGCG GCCTGCCCGC TCACCGCGAT GGAGCGGACG GAGCCCGTGC GCAACCCGGT GCTGCGCGCC GGCACCGATC TCTTTCCGGG GCGCAGGAAC TCGCGCGGCT TCGACCTCGC CGCGGCCGAG GATCTGGCGC TGATCGAAAG CGCGCGCAGC CCCCACCGGA CGGCGCTGTT CGATGCGCGG CCGATCCTCG CGGAATCGCT CGCAGGCGGG CAGCGGGCCG AGGTGACGGA TCCCGCCACC GGGGCGCGGG TGGGCAATGT GCTGCCCGCG AGCCTGCCCG ATGTGGAGAC CGCGCTCCAT CATGCCGTGC CGTGGGAGGC GCGCCCCGAG GACCGGGCCG AGGTGCTGCG CCGCGCGGCC GACCTCTACG AGGCGAGCTT CGGCCCGATC TTCGCGCTTC TGGCGCGCGA GGCGGGCAAG ACCCTGCCCG ATGCGGTGGG CGAGCTGCGC GAGGCGGTGG ATTTCCTGCG CTACTATGCG GCCGAGGGCG AGGCGCTGAC TGCGCCGCCC TTGGGCACCG TGGTCTGCAT CAGCCCCTGG AACTTCCCGC TCGCGATCTT CACCGGGCAG ATCGCGGCCG CGCTGATGGC GGGCAATGCG GTGCTGGCCA AACCCGCCGA GCAGACGCCG CTGATCGCGG CCCTCGCGGT CGAGCTTCTG CATCGGGCGG GCGTTCCCGC CACCGCGCTC CAGCTTCTGC CGGGCGAGGG CGGGACGGTG GGCGCGGCTC TCACGCGCGA TCCGCGGGTG GGGGGCGTGG TCTTCACCGG CTCGACCGAG ACGGCGCGGG CGATCCGGCA GAGCATGGCG GACCATCTCG ATCCCGCGGC CCCGCTCATC GCCGAGACCG GCGGCCTCAA TGCGATGATC GTCGATTCGA CCGCGCTGCC CGAGCAGGCG GTGCGCGACA TCCTCGCCTC GGCCTTCCAG TCGGCGGGCC AGCGCTGCTC GGCGCTCCGC TGCCTCTATC TGCAGGAGGA TGTGGCCGAG AGCGTGCTCG AGATGCTCTG CGGCGCGATG GACGAGCTGC AGGCAGGCGA GCCCTGGGAT CTGGCAACCG ATCTGGGCCC GGTGATCGAT GCCGAGGCGC AGGCGGGCAT CCGCGACTGG ATCGCCGCCG CCCGCGCCGA GGGGCGGGTG CTGAAGCAGA TGGCGGTGCC TGCGCGCGGC ACCTTCGTGG GCCCGACGGT GATCCGCGTG GGCTCGATCC GCGAGATGGA CCGCGAGATC TTCGGGCCGG TCCTGCATGT CGCGACCTTC CGCGCCACCG AGATCGACCG GGTGATCGCC GAGATCGACG CCACGGGCTA CGGGCTGACC TTCGGCCTGC ACAGCCGGAT CGACGACCGG GTGCAGGCGC TGGTGGGCCG GCTGCGGGTG GGCAACATCT ACGTCAACCG CAACCAGATC GGCGCCGTGG TGGGCAGCCA GCCCTTTGGC GGCGAGGGGC TCTCGGGCAC CGGGCCGAAG GCGGGCGGCC CGGCCTATCT GGCGCGGCTG GTGAGCCGGC CCGCGCCGGA TTGCGCCGGG AGCGAGGCGC CCGCGCAGCC CGCGGCCGAG GTGCAGGCGG CGCTCGACCG CCTCGCGCCC AAGGCCGGAG AGCTCATCGG CACCCGCGCA CTGCCGGGGC CCACGGGCGA GTCGAACCGC CTCTCGCTCC TCCGCCGTCC GCCGCTCCTC TGCCTCGGGC CGGGTCCGGC CGCCGCCCGG GCGCAGGCCG AGGCGGTGCA GGCGCTCGGC GGGCTCGCGG TCGAGGCGCC GGGCCTTGCG CCCGAGGCGC TGGCCACGCT TCGCGGCTTT GCGGGCGCGC TCTACTGGGG CGGGGCCGGG GACGCGCGGC CCCGGGCGCA GGCGCTGGCG TCGCGCGAGG GGGCGATCCT GCCGCTGATC GGCGGCCTGC CCGACGAGGC CCATGTCGCG GTCGAGCGGC ATCTCTGCAT CGACACCACC GCTTCGGGGG GCAATGCCGA ACTTCTCGCC GCGGCCTCCG GCGGGCGGTA G
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Protein sequence | MLAAAVHPTS SDTLDEAGLV ARLIAEADLD PSARARIVAR GADLVRRIRQ GSRPGLMEGF LAEYGLSTDE GIALMCLAEA LLRVPDAETM DALIEDKIAP SDWNRHLGRS ASSLVNASTW ALMLTGKVLD DREPGVAGHL RGLVRRLGEP VIRKAVARAM KEMGRQFVLG ETIEGAMERA AELEAKGYSY SYDMLGEAAR TEADARRYHL AYSRAITAIA AAAKSRDIRD NPGISVKLSA LHPRYEVAKR ARVLAELVPR VTALAGLARA AGLGFNIDAE EADRLDLSLE VIAAALAEPS LAGWDGFGVV VQAYGRRAGE VLDRLYGMAV RLDRKLMVRL VKGAYWDGEV KRAQVLGLAD FPVFTRKMAT DVSYIAQARK LFSMSDRIYP QFATHNAHTV AAILELAEGR PFEFQRLHGM GERLHDLVLT EEKTRCRIYA PVGAHRDLLA YLVRRLLENG ANSSFVNQIV DESVSPEAVA ACPLTAMERT EPVRNPVLRA GTDLFPGRRN SRGFDLAAAE DLALIESARS PHRTALFDAR PILAESLAGG QRAEVTDPAT GARVGNVLPA SLPDVETALH HAVPWEARPE DRAEVLRRAA DLYEASFGPI FALLAREAGK TLPDAVGELR EAVDFLRYYA AEGEALTAPP LGTVVCISPW NFPLAIFTGQ IAAALMAGNA VLAKPAEQTP LIAALAVELL HRAGVPATAL QLLPGEGGTV GAALTRDPRV GGVVFTGSTE TARAIRQSMA DHLDPAAPLI AETGGLNAMI VDSTALPEQA VRDILASAFQ SAGQRCSALR CLYLQEDVAE SVLEMLCGAM DELQAGEPWD LATDLGPVID AEAQAGIRDW IAAARAEGRV LKQMAVPARG TFVGPTVIRV GSIREMDREI FGPVLHVATF RATEIDRVIA EIDATGYGLT FGLHSRIDDR VQALVGRLRV GNIYVNRNQI GAVVGSQPFG GEGLSGTGPK AGGPAYLARL VSRPAPDCAG SEAPAQPAAE VQAALDRLAP KAGELIGTRA LPGPTGESNR LSLLRRPPLL CLGPGPAAAR AQAEAVQALG GLAVEAPGLA PEALATLRGF AGALYWGGAG DARPRAQALA SREGAILPLI GGLPDEAHVA VERHLCIDTT ASGGNAELLA AASGGR
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