Gene Rsph17029_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0833 
Symbol 
ID4896851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp846623 
End bp847756 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content71% 
IMG OID640111417 
ProductABC transporter related 
Protein accessionYP_001042716 
Protein GI126461602 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCC TGCCCCGCCC CGACCGAGCG CCCGAACCGG GGCAGCCCGC GGTGCTGGTG 
CGGGATGTGG ACATGGATTT CGGCAACGGC CCGCTCGCCG TGGCGGGCGC GAGCTTCGCG
CTCGCCCGCG GGCGCTTCCT CACCATCCTC GGCCCCTCGG GGTCGGGCAA GACCACGCTC
CTGCGGATCA TCGCGGGCTT CCAGCAGCCG ACCCGCGGCG AGATCCGCCT CGGCGGGCAG
GCGGTCACCG CCACCGCACC GCACCGCCGC TCGATCGGCA TGGTGTTCCA GAAGCTCGCG
CTCTTTCCCC ACATGACCGC GGCCGAGAAT GTGGCCTTCC CGCTCAAGAT GCGCCGCCAC
GATCCGGCGA CCATTCCGGG CAAGGTCGAG CGCTACCTCG ATCTCGTGCG GCTGGGCGGT
CTCGGCGGGC GGCGCATCCA CGAGCTTTCG GGCGGCCAGC AGCAGCGCGT GGCCATCGCC
CGCGCGCTGG TGTTCGAGCC CGAACTTCTG CTGCTCGACG AGCCGCTGGC CGCGCTCGAC
CGCAAGCTCC GCGAGGAGAT GCAGCTCGAA TTCCGGCGCA TCCAGAAGGA ATTGGGCGTC
ACCACGATCA ACGTGACCCA CGACCAGCGC GAGGCGCTGG TCGTGTCCGA CGAGATCATC
GTGATGGATC ACGGCCGCAT CCAGCAGCAT GCGCGCCCGG TCGAGATGTA TCGCCTGCCC
GCCAACCCGT TCGTGGCGGG CTTCGTCGGC GTCTCGACCT TCCTCGAGGG GCGGCGGACC
GCCACCGGCC TCGACGCGGG TGGGGCGGCC TGCGCCGGCA CGCCCGTGGG CGCGATCCCC
GAGGGCGCCC CCGTGCAGGG CGCGATCCGG GCCGAGCAGA TCCGCATCGA GGCCGACCCG
GTGCGGCTTG CCGGCTGCGA CACGGTCCTG CGCGGGATCG TGCGCGACAC GATCTTCGAG
GGCGAACGGC TCCTCTATCT CGTCGAGGTG CCGGCGCTCG GCCTCGCGCT GCAGGTCTAT
CACCACGACC CCGAGGAATT CGCGCTGTTC GACGCCGGGG CGGAGGTGAG CCTCGGCTGG
AATGCGCGCG ATCTGCTGAT CTTCAACCGG CAGGATGGCC GGGACGGACG ATGA
 
Protein sequence
MTPLPRPDRA PEPGQPAVLV RDVDMDFGNG PLAVAGASFA LARGRFLTIL GPSGSGKTTL 
LRIIAGFQQP TRGEIRLGGQ AVTATAPHRR SIGMVFQKLA LFPHMTAAEN VAFPLKMRRH
DPATIPGKVE RYLDLVRLGG LGGRRIHELS GGQQQRVAIA RALVFEPELL LLDEPLAALD
RKLREEMQLE FRRIQKELGV TTINVTHDQR EALVVSDEII VMDHGRIQQH ARPVEMYRLP
ANPFVAGFVG VSTFLEGRRT ATGLDAGGAA CAGTPVGAIP EGAPVQGAIR AEQIRIEADP
VRLAGCDTVL RGIVRDTIFE GERLLYLVEV PALGLALQVY HHDPEEFALF DAGAEVSLGW
NARDLLIFNR QDGRDGR