Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0812 |
Symbol | fumC |
ID | 4896479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 821803 |
End bp | 823197 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111396 |
Product | fumarate hydratase |
Protein accession | YP_001042695 |
Protein GI | 126461581 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.661312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCAA CCCGCACCGA GACCGACAGC TTTGGCCCGC TCGAGGTTCC TGCCGACAAA TACTGGGGCG CCCAGACGCA GCGGTCGATC CAGAACTTCC CGATCGGCTG GGAGAAGCAG CCGGTGGCCA TCGTCCGGGC CCTGGGCGTG ATCAAGAAGG CCTGCGCGCT CGTCAATGTG GCCCAGGGCG ACATGCCCGA GGAGCTGGCT CAGGCCATCG CCGCTGCCGC GACCGAAGTG ATCGAGGGCC GCTTCGACGA CAATTTCCCG CTCGTCGTCT GGCAGACCGG CTCGGGCACC CAGTCGAACA TGAATGCGAA CGAGGTGATC TCGAACCGCG CCATCGAGAT GCTGGGCGGC ACGATGGGCT CGAAGAAGCC CGTCCATCCG AACGACCATG TGAACATGGG CCAGTCCTCG AACGACACTT TCCCCACCGC CATGCACGTG GCCATCGGCA TGATGGCGCG CGACGTGCTG CTGCCGGGGC TCGAGAAGCT CCATGCAGCC CTTGTCGCCA AGTCGGAAGA GTTCAAGGAC ATCATCAAGA TCGGCCGCAC CCACACCCAG GATGCGACGC CGCTGACGCT CGGGCAGGAA TTCTCGGGCT ATGCCAAGCA GGTCGAGAAG GGCATCGCCC GCGTGAAGGC CTGCCTCCCC GACATCTACG AGCTGGCGCA GGGCGGCACG GCGGTGGGCA CGGGCCTGAA CACCCGGCAG GGCTGGGACA GCCGCGTGGC CGCGAAGATC GCCGAGATCA CGGGCCTCCC CTTCGTCACC GCCGAAAACA AGTTCGAGGC TTTGGCCGCC CACGATGCGA TGGTGATGTT CTCGGGCGCG CTGAAGACGG TCGCGGCCTC GCTCTTCAAG ATCGCCAACG ACATGCGGCT TCTGGGCTCG GGTCCGCGCT CGGGTCTGGG CGAGCTGATC CTGCCCGAGA ACGAGCCCGG TTCCTCGATC ATGCCGGGCA AGGTGAACCC GACGCAGGCC GAGGCGCTGA CCATGGTCTG CGCCCATGTG ATGGGCAATG ACGCGGCGAT CGGCTTCGCG GGCAGCCAGG GCCACTTCGA GCTGAACGTC TACAATCCGA TGATGTCCTA CAACGTGCTG CAATCCATGC AGCTTCTGGG CGATGCGGCG GGCAGCTTCA CCGACAACAT GGTGGTGGGC ACGCAGGCCA ACGTGGCGCG GATCGACAAG CTGATGAAGG AGAGCCTGAT GCTGGTGACG GCGCTGGCCC CCACCATCGG CTATGACAAT GCCACCAAGG TCGCCAAGAC CGCCCACAGG AACGGCACGA CGCTGCGCGA AGAGGCCATC GCCCTCGGCC TCGTCGATGC CGAGACCTTC GACCGGGTGG TCCGCCCCGA GGACATGATC GGGCCGAAAG GCTGA
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Protein sequence | MTATRTETDS FGPLEVPADK YWGAQTQRSI QNFPIGWEKQ PVAIVRALGV IKKACALVNV AQGDMPEELA QAIAAAATEV IEGRFDDNFP LVVWQTGSGT QSNMNANEVI SNRAIEMLGG TMGSKKPVHP NDHVNMGQSS NDTFPTAMHV AIGMMARDVL LPGLEKLHAA LVAKSEEFKD IIKIGRTHTQ DATPLTLGQE FSGYAKQVEK GIARVKACLP DIYELAQGGT AVGTGLNTRQ GWDSRVAAKI AEITGLPFVT AENKFEALAA HDAMVMFSGA LKTVAASLFK IANDMRLLGS GPRSGLGELI LPENEPGSSI MPGKVNPTQA EALTMVCAHV MGNDAAIGFA GSQGHFELNV YNPMMSYNVL QSMQLLGDAA GSFTDNMVVG TQANVARIDK LMKESLMLVT ALAPTIGYDN ATKVAKTAHR NGTTLREEAI ALGLVDAETF DRVVRPEDMI GPKG
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