| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0715 |
|---|
| Symbol | |
|---|
| ID | 4895638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 725516 |
|---|
| End bp | 727381 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640111299 |
|---|
| Product | putative peptidyl-prolyl cis-trans isomerse |
|---|
| Protein accession | YP_001042600 |
|---|
| Protein GI | 126461486 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.142181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.120674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC TGACGTCGAT CGAGCACCAC AAGCCGAAGA AGAAGGGCAC GCAGCTCGTC
TTCTGGGGCC TCGTCGGGCT GATGGCCGTG GGCCTCGGCG GCTTCGGCGT GACCAATTTC
GGCGGCGGCC TCAGCACGGT CGGCAGCGTG GGCGACCGCG ACATCACCAC CGGGGCCTAT
GCCCGCGCGC TCCAGCAGGA GATGCGGGCG CTCGGCGCGC AGATCAACCA GCCGGTCACG
ATGGAGATGG CCAAGGCCTT CGGCCTCGAC CAGCAGGTGC GTCGCCGGCT CGTCACCGAG
GCCGCGCTCT CGAACGAGGC CGACCGGATC GGCCTGTCGG TGGGCGACGC GCGCGTGGCG
CGCGAGATCA CCGGCACGGA CGCCTTCCAC GGCCCCTCCG GCCAGTTCGA CCGCGAGACC
TACCGGCTCG TGCTGCGCCA GAACAACCTC TCCGAGGGCG AGTTCGAGAC CGGCCTGCGC
GAGGATATGG CGCGCTCTCT CCTGCAGGGC GCGGTGGGCG GCGGCTTCAT CGCCCCGGCC
CAGATGGTGA ATACGCTCCA CGCCTATATC GCCGAGCGGC GGAGCTTCGG GCTGCTGCGC
GTGACCGAGG CCAATCTGGC CAAGCCGCTG GCCGCACCGA CCGATGCCGA GCTTCAGGCC
TGGTACGAGG CGCATCCGGC CGATTTCACC GCCCCCGAAA CGAAGCGGAT CACCTATGCC
GCGCTGCTGC CGCAGGATGT GGCCGCGACC CTGCCCGCGG ACGAGGCGGC GCTGCGCCGG
CTCTACGACG AGCGGCATGC CGAGTTCGTG CAGCCCGAGC GGCGGCTGGT CGAGCGGCTG
GTCTTCCCCA CGGCCGAGGC CGCCGCGGAA GCGCGCAAGC GCCTCGATGC GGGCACCCCT
TTCGAGACGC TCGTCTCCGA GCGCGGGCTG GAGCTCGCCG ACATCGACCT CGGCGATGCG
TCGCGGGATG CTCTCGGCGG CGCGGCAGAC GCCGTCTTCG CCCTGACCGA GCCCGGCATT
GCGGGGCCGG TCGAGACCGA CCTCGGCCCG GCGCTCTTCC GGGTGAACGG GGTGATCGCG
GCGCATGAAA CGCCCTTCGA GGAGGTGCGC GACGATCTCC TGACGGAATA TCAGCAGGAA
GCCGCAGGCC GCGCCATCGC GGGCCGCCGC GAGCAGATCG ACGACCTTCT GGCCGCCGGC
GCCACGCTCG AGGATCTTGC CGGCGAGGCC GGCATGAAGA TCGCGACCGT CGATTACGCG
CCGGGTCTCG ATTCCGACAT CGCGGGCTAC GAGGCCTTCC GCACGGCCGC CGACAAGCTG
CAGAAGGACG ATTTCCCCGA GACGATCCTG CTGAACGACG GGGGCCTTCT GGCCATGCGG
CTGGACGAGG TGGTACCGCC GAAGCTGAAG CCCTTCGAGG AGGTGCGCGA CGATGTGGCC
GAGGCGGCCC GCAAGGACGC CCTGACCAAG GCGCTGGCCG CCCGCGCGAC CGAGATCGCC
AAGGCCGCCG AGGAGGGCAC CGACCTCGGC AGCTTCGGCC CGGTCGAGGA TCTGGGACCG
ATGACCCGCG ACGGCTTCGT CGAGGGCGTG CCCGAGACGC TCGTGCCCGC CGCCTTCGAG
ATGCAGCAGG GCGCTTTCCG CGCCATCGAG GGGGCGGACT TCGCCGGCGT CCTGCGGCTC
GACGCGGTCG AACCCGCGGC AGCCGACGAC GAGGCGGCCA AGGCGCTCAA GGCCTCGCTC
TCGGCGCAGA TCGAGCAGGC GCTGTCGCAG GATGCGCTCG CGCTCTTTTC CAACAGCCTG
ATGCAGGAGG CCGGCATCAC GCTCAACGAC GCCGCCATCT CTGCGGTTCA GGCCCAGTTC
CAGTAA
|
|---|
| Protein sequence | MSKLTSIEHH KPKKKGTQLV FWGLVGLMAV GLGGFGVTNF GGGLSTVGSV GDRDITTGAY
ARALQQEMRA LGAQINQPVT MEMAKAFGLD QQVRRRLVTE AALSNEADRI GLSVGDARVA
REITGTDAFH GPSGQFDRET YRLVLRQNNL SEGEFETGLR EDMARSLLQG AVGGGFIAPA
QMVNTLHAYI AERRSFGLLR VTEANLAKPL AAPTDAELQA WYEAHPADFT APETKRITYA
ALLPQDVAAT LPADEAALRR LYDERHAEFV QPERRLVERL VFPTAEAAAE ARKRLDAGTP
FETLVSERGL ELADIDLGDA SRDALGGAAD AVFALTEPGI AGPVETDLGP ALFRVNGVIA
AHETPFEEVR DDLLTEYQQE AAGRAIAGRR EQIDDLLAAG ATLEDLAGEA GMKIATVDYA
PGLDSDIAGY EAFRTAADKL QKDDFPETIL LNDGGLLAMR LDEVVPPKLK PFEEVRDDVA
EAARKDALTK ALAARATEIA KAAEEGTDLG SFGPVEDLGP MTRDGFVEGV PETLVPAAFE
MQQGAFRAIE GADFAGVLRL DAVEPAAADD EAAKALKASL SAQIEQALSQ DALALFSNSL
MQEAGITLND AAISAVQAQF Q
|
|---|
| |