Gene Rsph17029_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0707 
Symbol 
ID4895588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp717373 
End bp718056 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID640111291 
ProductLexA repressor 
Protein accessionYP_001042592 
Protein GI126461478 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.265887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGTA AGCAGATGGA ACTGCTCGAT TTCATCAAGA CGCGGATGGA TCGTGACGGG 
GTGCCGCCCT CGTTCGACGA GATGAAGGAC GCGCTCGACC TCCGCTCGAA ATCGGGCATT
CACCGGCTCA TCACGGCGCT CGAGGAGCGG GGGTTCATCC GCAGGCTGGC GCACCGCGCC
CGCGCGATCG AGATCGTGAA ACTGCCCGAG GCGATGGAGC GGGCCGGCTT CAGCGCCCGG
GCCGCCAAGG CTGCGGCGGC CCCGCTGCCG AAGGGCGCCG TGACGGTCGA GACCGCCGGG
GCACTCGATC TGCCGCTCAT GGGCCGGATC GCGGCCGGTC TGCCGATCGA GGCCATCAAC
GGCGGCCCGC AGTCGGTCAC CGTACCCGGC ATGATGCTCT CGGGCCGCGG CCAGCATTAT
GCGCTGGAGG TGAAGGGGGA TTCGATGATC GCCGCCGGCA TAAACGACGG CGATATCGTG
GTGATCCGCG AGCAGCAGAC GGCCGACAAT GGCGACATCG TGGTAGCGCT GGTGGCCGAT
CACGAGGCCA CGCTGAAGCG CTACCGCCGT CGCGGCGGCA TGATCGCTCT CGAGCCCGCC
AACGACTCCT ACGAGACGCA GGTCTACCCC GAACAGATGG TGAAGGTGCA GGGACGGCTC
GTCGGGCTGA TCCGCAGCTA CTGA
 
Protein sequence
MTRKQMELLD FIKTRMDRDG VPPSFDEMKD ALDLRSKSGI HRLITALEER GFIRRLAHRA 
RAIEIVKLPE AMERAGFSAR AAKAAAAPLP KGAVTVETAG ALDLPLMGRI AAGLPIEAIN
GGPQSVTVPG MMLSGRGQHY ALEVKGDSMI AAGINDGDIV VIREQQTADN GDIVVALVAD
HEATLKRYRR RGGMIALEPA NDSYETQVYP EQMVKVQGRL VGLIRSY