| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0679 |
|---|
| Symbol | |
|---|
| ID | 4896540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 683858 |
|---|
| End bp | 685015 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640111263 |
|---|
| Product | ribonuclease D |
|---|
| Protein accession | YP_001042564 |
|---|
| Protein GI | 126461450 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0349] Ribonuclease D |
|---|
| TIGRFAM ID | [TIGR01388] ribonuclease D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCA TCACCACCAC CGAGGCGCTG GCCGCCTTCT GCGAGGCCGC CAAGGCCGAA
CCCTATGTCA CGATCGACAC GGAATTCCTG CGCGAGCGCA CCTACTGGTC CAAGCTCTGC
CTGATCCAGA TGGCGCTGCC GGGCAAGACC GGCGAGGCGG TGCTGGTGGA CCCCATCGAG
GGGCCCGACA TGTCGCTCGA GCCGCTCTAC GACCTCTTCC GCCACGAGGC GACGGTGAAG
GTCTTCCATG CCGCCCGGCA GGATCTCGAG ATCTTCTTCG TCGAGGGGCG CGCCTTCCCC
GTGCCGCTCT TCGACACGCA GGTCGCGGCC ATGGTCTGCG GCTTCGGCGA GCAGGTCGGC
TACGAGACGC TGGTCAAGAA GATCGCACGC GAGCAGCTCG ACAAGACCTC GCGCTTCACC
GACTGGTCGC GCCGTCCGCT CAGCGACGCG CAGAAGACCT ATGCCATCGC CGATGTGACC
CACCTGCGGG TGATCTACGA ATGGCTTTCG GCTCAGATCG AGAAGAACGG CCGGCAGAAG
TGGGTCGAGG AAGAGCTCGC GATCCTCACC GATCCCGAGA CCTACACGGT CCGGCCCGAA
GAGGCTTGGC TCAGGATCAA GACCCGCACC ACCTCGGGGC GCTTCCTCGC CGTGGTGAAG
GAGCTCGCCC GTTTCCGTGA GGACTATGCG CAGAAGAACA ACGTCCCGCG CTCGCGCGTG
ATGAAGGACG ATGCGCTGCT CGAGATCGCC TCCACGCGGC CCACGAATGC CGAAGAGCTG
GGCCGCTCGC GGCTTCTGCT GCGCGAGGGG AGGCGGGGCG ACATCGCCGA TGGCATCCTT
GCCGCGGTGA AGGCGGGCAT GGAGGTCAAG AACGAGGATC TGCCGAAGCC CGATCTCTCG
CGCGAGCAGC TTCAGGTGAA CCCGGCGCTG GCCGATCTGC TGCGGGTGCT GCTCAAGGCC
AAGTCGGAAA GTCTGGGCGT TGCGGCGCGG CTCATCGCCT CGGCCTCCGA GCTCGATGCC
ATTGCCGCGG GCGAACGCGA TCTGCCCTCG CTCAAAGGCT GGCGGCTCGA GGCCTTCGGG
GCCGATGCGC TGCGCCTCTG CCGGGGCGAG ATCGCCCTGT CGGCCAAGGG CAACGACGTG
CGCGTGGTCA AGCTCTGA
|
|---|
| Protein sequence | MQTITTTEAL AAFCEAAKAE PYVTIDTEFL RERTYWSKLC LIQMALPGKT GEAVLVDPIE
GPDMSLEPLY DLFRHEATVK VFHAARQDLE IFFVEGRAFP VPLFDTQVAA MVCGFGEQVG
YETLVKKIAR EQLDKTSRFT DWSRRPLSDA QKTYAIADVT HLRVIYEWLS AQIEKNGRQK
WVEEELAILT DPETYTVRPE EAWLRIKTRT TSGRFLAVVK ELARFREDYA QKNNVPRSRV
MKDDALLEIA STRPTNAEEL GRSRLLLREG RRGDIADGIL AAVKAGMEVK NEDLPKPDLS
REQLQVNPAL ADLLRVLLKA KSESLGVAAR LIASASELDA IAAGERDLPS LKGWRLEAFG
ADALRLCRGE IALSAKGNDV RVVKL
|
|---|
| |