| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0577 |
|---|
| Symbol | |
|---|
| ID | 4897564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 601144 |
|---|
| End bp | 602139 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640111163 |
|---|
| Product | tRNA-dihydrouridine synthase A |
|---|
| Protein accession | YP_001042465 |
|---|
| Protein GI | 126461351 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGAAC TGAAGCAGCC TTCGTCAACG GCCTGCCGCC TGTCCGTGGC TCCGATGCTG
GATTGGACCG ACCGCCATTG CCGCTTTTTC CACCGGCTGA TGACGCGGCG CGCCATGCTT
TATACCGAGA TGGTCACCGC GCCCGCCGTC ATTCACGGGC CGCGCGACCG GCTTCTCGGG
TTCTCCGAGG CGGAGCATCC CGTGGCGCTG CAGCTCGGCG GCTCCGATCC GGCGGAGCTT
GCACAGGCGG TCCGGCTGGC GGAACCCTAT GGCTATGACG AGATCAACCT CAACGTGGGG
TGCCCCTCCG ACCGTGTGCA GTCCGGCTGC TTCGGGGCCG TGCTGATGGA GCGGCCTTCC
CTCGTCGCCG ACTGCGTGGC GGCCATGATC GCGGAAAGTC CGGTGCCCGT CACCGTCAAG
TGCCGGATCG GCGTGGACGA GCAGGAGCCC TCCGAGGTGC TGCCCGCCTT CCTCGAGACC
GTGGCCGCTG CCGGTGTGCG GCATTTCGTG ATCCACGCCC GCAAGGCCTG GCTGCAGGGG
CTGAGCCCAC GGGAGAACCG CGAGATCCCG CCGCTCGATT ACCCGCTGGT GATCGCCATG
AAACGCCGCT TCCCCGAACT CACGATCTGT CTCAACGGCG GGGTGGGCAG CCTTACGCAG
GCCGAGGCGC TGCTGGCGCA GGGGCTCGAC GGCATCATGA TCGGCCGTGC CGCCTATAAC
GAGCCCGAGC TGCTGCTCGA GGCCGACCGG CTCTGGGGCG AGGAGCCGCC GCGCGATCTC
GCGGCGGTGC TGGCTGACAT GCGCCCCTAC ATCTCGGCGC ATCTCGAGGG CGGCGGTCGG
CTGCACCAGA TCACCCGGCA CATGCTCGGC CTCTTTGCCG GGCGGCCCGG TGCCCGCCAC
TGGCGGCGCA TCCTCTCCGA GGGCGCCTCC CGGCCCGGGG CAGGGCTCGC GCTCTTCGAC
GAGGCGCTCG AGGCGGTGCA GCCGCGCGCG GCCTGA
|
|---|
| Protein sequence | MTELKQPSST ACRLSVAPML DWTDRHCRFF HRLMTRRAML YTEMVTAPAV IHGPRDRLLG
FSEAEHPVAL QLGGSDPAEL AQAVRLAEPY GYDEINLNVG CPSDRVQSGC FGAVLMERPS
LVADCVAAMI AESPVPVTVK CRIGVDEQEP SEVLPAFLET VAAAGVRHFV IHARKAWLQG
LSPRENREIP PLDYPLVIAM KRRFPELTIC LNGGVGSLTQ AEALLAQGLD GIMIGRAAYN
EPELLLEADR LWGEEPPRDL AAVLADMRPY ISAHLEGGGR LHQITRHMLG LFAGRPGARH
WRRILSEGAS RPGAGLALFD EALEAVQPRA A
|
|---|
| |