| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0557 |
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| Symbol | |
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| ID | 4897880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 583964 |
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| End bp | 585349 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640111142 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001042445 |
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| Protein GI | 126461331 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA AGGACATATT CCGGGCCGGG CTGGCGGTCC TCGCGCTCGC GGCGGGCATG
GCGCTCACGC CCGCGGCGGC GCAGACCCTG CGCGTCATGG AGGGCTCGGC CTCGGGGGCG
CTCAATGTGC CGATGAACCG CGCGGTCGTG GTGGAAAGTG ACCGGCCCTT CGCCGAGCTC
TCCATCGCCA ATCCCGGCAT CGCCGACATC TCCACCCTGT CCGAGACCTC GATCTATGTC
CTCGGCAAGG CGCCCGGCCG CACCACGCTC ACGCTTCTCG GGGCCGACGG GCGGCTGATC
TCGAACGTGG ACGTGCATGT CACGCCCGAC GTGGCCGAGT TCAAGGAGCG GCTGCGCCAG
ATCCTGCCCG GCGAGAATAT CGAAGTCCGC ACCGCGAACG ACGGGATCGT GCTGTCCGGC
ACCGTCACCA GCACGGCCAA GCTCGACCGC GCGCTCGATC TCGCCAGCCG GTACGCGCCC
GACCGCGTGT CGAACCTGAT GAGCGTCGGC GGCACGCAGC AGGTCATGCT GAAGGTCCGC
TTCGCCGAGA TGCAGCGCTC GGTCGCCAAA AGCCTCGGCT CGTCGATCTA CGCCCGCAAT
GGATCGGGCT CGGTGATCGG CGGCACGGGG ACGCTGCTGC AGAACGGCAT TCCGCCGTCG
GGAGCTCCGA TCAGCACCTC AGGGAATGGC GCCCTGAGCC TCGGCTTCTC GGTCGGCGCG
CTCGAGTTTC AGGTGCTGCT CGAGGCTCTC GAATCGAAGG GGGTGGTGCG GACGCTGGCC
GAGCCGAACC TCACCGCCCT CTCGGGGCAG GAGGCAAAGT TTCTCGCCGG CGGCGAATAT
CCGATCCCGG TGGCCAGCGG CGACGAGAAG ATCTCGATCG AATACAAGCC CTTCGGCGTC
GAGCTGAACT TCACCCCGGT GGTGGTGGAC GGCAACCAGA TCAACCTGAT GATCAATGCC
GCCGTCTCCT CGATCGACAA TACCGTGACG CTGGAAAGCT CGGGCTTCAC CATCAACGCC
TTCAAGCGGC GCGAGACCTC GACGACCGTC GAGATGCGCG ACGGCGAGAG CTTCGCCATC
GCCGGGCTCC TGCAGGACGA TTTCCGCAAC CTCAACGGCC AGGTGCCGTG GCTGGGCGAC
ATCCCGATCC TCGGCGCCCT CTTCCGCAGC GCCGAATACC AGCGCTCGCA GAGCGAGCTC
GTCATCATCG TCACGCCGCA TCTCGTGACC CCCACCCGGG GCGAGGCGCT GGCGCTGCCC
ACCGACCGGG TGAAACTGCC CTCTGAAAAG GATCTCTTCC TGTTCGGCCG CGTCACCGGC
CGGGGGGCGG CGGCCGAGGT CGCCCGGCAG GATTTCAGCG GCTCCTACGG CTATGTGATG
GAGTGA
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| Protein sequence | MSTKDIFRAG LAVLALAAGM ALTPAAAQTL RVMEGSASGA LNVPMNRAVV VESDRPFAEL
SIANPGIADI STLSETSIYV LGKAPGRTTL TLLGADGRLI SNVDVHVTPD VAEFKERLRQ
ILPGENIEVR TANDGIVLSG TVTSTAKLDR ALDLASRYAP DRVSNLMSVG GTQQVMLKVR
FAEMQRSVAK SLGSSIYARN GSGSVIGGTG TLLQNGIPPS GAPISTSGNG ALSLGFSVGA
LEFQVLLEAL ESKGVVRTLA EPNLTALSGQ EAKFLAGGEY PIPVASGDEK ISIEYKPFGV
ELNFTPVVVD GNQINLMINA AVSSIDNTVT LESSGFTINA FKRRETSTTV EMRDGESFAI
AGLLQDDFRN LNGQVPWLGD IPILGALFRS AEYQRSQSEL VIIVTPHLVT PTRGEALALP
TDRVKLPSEK DLFLFGRVTG RGAAAEVARQ DFSGSYGYVM E
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