Gene Rsph17029_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0556 
Symbol 
ID4896532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp583317 
End bp583958 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content70% 
IMG OID640111141 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001042444 
Protein GI126461330 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGC GCTGTGCCCC TCTCCTCGCC CTGCCGCTGG CTCTCGCGCT CGCGGCCTGC 
GGCGACCGGC CGGTCTCGAC CGAGATCAAC GACGGCACCT TCGGCAATGC CACGATGAAC
AACTCGCTCT TGCAGATGGG GGCGGTGAGC GCGACGCAGG CCCTGGGGCA GCGGTTCGCT
TCCGAGGTCG ATCCGACGAT CACCTTCCCC TTCGACAGCG CCGCCCTGAC GCCGGAGGCG
CAGGCCACGC TGCGCCGGCA GGCGGACTGG ATCCGGCAGT TCCCCGAGGT GCGCTTCCGG
GTCTATGGCC ACACCGACCT CGTCGGCTCC GAGGCCTACA ACAAGCGGCT GGGGCTGCGC
CGGGCGAAGG CGGTGGTGGC CTATCTGGCC TCGCAGGGCA TCAGCCCGGC CCGTCTCGAG
GCGCTTGTTT CCTACGGGGA AACAAGGCCG GTGATTCCCG TCGCGGCGCC CGAGGAGCGC
AACCGCCGCA CCGTCACCGA AGTGTCGGGC TTCGTCACGG GACGCGGGGG CCAGATGAAC
GGCAAATATG CCGCCGTGGT CTTCCGCGAA TATGTCGCGG GCGCCACCCG GGAGCATCCG
AGGAACCGGG TGATCGCGAC GCAGGTGACG CCGGAAGGCT GA
 
Protein sequence
MRMRCAPLLA LPLALALAAC GDRPVSTEIN DGTFGNATMN NSLLQMGAVS ATQALGQRFA 
SEVDPTITFP FDSAALTPEA QATLRRQADW IRQFPEVRFR VYGHTDLVGS EAYNKRLGLR
RAKAVVAYLA SQGISPARLE ALVSYGETRP VIPVAAPEER NRRTVTEVSG FVTGRGGQMN
GKYAAVVFRE YVAGATREHP RNRVIATQVT PEG