Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0552 |
Symbol | |
ID | 4897582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 578261 |
End bp | 579241 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640111137 |
Product | type II secretion system protein |
Protein accession | YP_001042440 |
Protein GI | 126461326 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCC TCTCCCTGCT CGAGACCTAC CTGACCGACC GGCTGGGTCC GCTCGGCCCC CTCATCGCCG TGGGGTCGCT CGGGATCCTG CTCATCGCGC TCACCCTGCC CGTGATGCTG AAGAAACGCG TGGAGCCGTT CGACCGGATC CGCGCCCAGC GCACGGCGGC GGTGGCGGCG CCGGTTCAGA AGGGACAGGC GCTGCGCCGC GCGTCAGGCA GCGAGAAGCT CGACCGGTTC GCCAATCTCC TGGAGCCCAA GACCGCCGAA GAGATGTCGG CCTCGCGTCT CAAGATGATG CGCGCCGGCT ACCGCTCGAA GGGCGCCGTG CGCGCGTTCC ACGCGGCCCA GTTCGCGCTG GGGGTGGGGT TTCTGGCAGC CGGTCTCCTC TATGCGATGG TCGCCTCGGC CGCGGCACCG CTCACCATGC AGCAGATGGT GCTCTACACG ATCCTGCCCG GGGCCATCGG CTACTACCTG CCGGTCTACT GGATCAAGCG CCGCGCGCAG GAGCGCTACG ACCAGATCGT GTCGGGCTTT CCCGATGCGC TCGACATGAT GCTGGTCTGC GTCGAGGCGG GCCAGTCGCT CGATCAGTCG ATCCTGCGCG TGGCCCGCGA ATCCGCCGCG GGCTATCCGG CGCTTGCCGA AGAGTTCGAG ATGGTGGCCC ACGAGGTCAA GGCCGGGAAG GAGCGCGTGG CCGTGTTGAA GGACATGTCC GAGCGGGTGG GCATTCCCGA CGTTTCCTCC TTCGTGACGA CCCTCATCCA GTCGGCCACG TTCGGCACCT CGATCGCCGA GGCGCTCCGC GTTTACTCGT CCGAAATGCG CGACAAGCGC GTCATGCGGG CGGAGGAGAA GGCAAATACC TTGCCCACGA AGCTGACGCT CGGCACAATG CTTCTGACCG TGCCGCCGTT GATGCTGATC CTGATCGGCC CTTCGGTCTA TGGCATCGCC ACTCAGCTGG GCGGACAGTG A
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Protein sequence | MELLSLLETY LTDRLGPLGP LIAVGSLGIL LIALTLPVML KKRVEPFDRI RAQRTAAVAA PVQKGQALRR ASGSEKLDRF ANLLEPKTAE EMSASRLKMM RAGYRSKGAV RAFHAAQFAL GVGFLAAGLL YAMVASAAAP LTMQQMVLYT ILPGAIGYYL PVYWIKRRAQ ERYDQIVSGF PDALDMMLVC VEAGQSLDQS ILRVARESAA GYPALAEEFE MVAHEVKAGK ERVAVLKDMS ERVGIPDVSS FVTTLIQSAT FGTSIAEALR VYSSEMRDKR VMRAEEKANT LPTKLTLGTM LLTVPPLMLI LIGPSVYGIA TQLGGQ
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