Gene Rsph17029_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0522 
Symbol 
ID4897692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp547233 
End bp549143 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content72% 
IMG OID640111106 
Productgeneral secretion pathway protein E 
Protein accessionYP_001042410 
Protein GI126461296 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.450126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGCAC TCCCCGATTC CCTGCCCCAG ATCCGGCCGG GCCGCGCGCC TGCAGCGCCG 
CGCCCCCTGC CCTCGCCCGC GGAGGCCGCG GAGCCGCTGG GCGTGATGCT GCTGCGCGAA
GGGCATCTAG CGCCGCACCG GATCATGGCG GCCCTCAGTC ACGGCGGGCG GCCATCCGCG
CCGCTGGCCG ATGTGCTTCT CGCCGAAGGC GCCCTGTCCG AGGACGAGAT CCTTGCCATG
ATGGCGCGGC GGAGCGGGCT GCCGGTGCTC GACCCCGCGG CCGAGCGGCC CGATCCCCGG
CTCATCGACC GGCTGGGGGT GCGCGACTGT CTGCGCGAGG GCCTTCTGCC CCTCCGCGAC
ACGGGCAGCG CCGTCCTGCT GGCGGCGGCC GCCCCCGAGA GCTTTCGCCG CCACCGGCCG
CGGCTCGAGG AGCTGTTCGG CACCGTGATC CCCGCCCTGG CCACCCGCTC GTCCATCGAG
GCCGCGCTGC AGGAGGTGCG CGCGGACGCC ATCGGAACCG CGGCCGAACT TCGGGTCGCA
CCGGAGGAAA GCTGCCGCGA CTGGCGCACC GGGCAGATGA CGCGGTTTGC GGCGCTGGCG
GGCCTCGCGC TCGCCGCGGG CCTCGCCTTG GCACCGGGCC TCGTGCTGCT TGCCCTGACC
GCCTGGGCGC TTCTGGCGCT GGCCTGCGGC ACAGCGCTGC GGCTGGCGAC CGCGGTGGCG
AGCCTGCGCC GCCCTCCGCC CGAGCCCGAA AGCCCGCCGC TCCTGCATCT GCCGATGGTC
TCGATCATCG TGGCACTCTA CCGCGAGGAG GATATCGCGG GCCGTCTCGT GGCGCGCCTC
GGCCGCCTCG ACTATCCCCA CGACCGGCTC GAGATCCTGC TCGTGGTGGA AGAGGCCGAC
CGACGGACGC GGCGGGCGCT GCTCGAGGCG CGCCTGCCGC CCTGGATGCG GATCGTGGTC
TCGCCCAAAG GCGCGATCCG CACCAAGCCG CGGGCGCTCA ACGTGGCGCT CGACCATTGC
CGGGGCTCCA TCGTGGGCGT CTACGACGCC GAGGATGCGC CCGAGCCCGA CCAGATCCGC
CGCGTGGTCG AGGGCTTCAG CCGGCGCGGC TCTCACGTCG CCTGCCTGCA GGGACGGCTC
GACTATTACA ACCCGCGCAC CAACTGGCTG TCGCGCTGCT TCACCATCGA ATATGCGGCC
TGGTTCCGGC TGATGCTGCC GGGGCTCGAC CGGCTGGGGC TCGTGGTCCC GCTCGGAGGC
ACCACCCTCT TCTTCCGCCG CGCGGCGCTC GAGGAGCTGG GCGCCTGGGA CGCGCATAAC
GTGACCGAGG ATGCGGATCT CGGCATCCGC CTCGCGCGGC ACGGCTACCG CACCGACCTC
ATCGACACGG TGACGGCCGA GGAAGCCAAC TGCCGCGCCA TCCCCTGGAT CAAGCAGAGA
TCGCGCTGGA TCAAGGGCTT CATGATGACA TGGGCCGTCC ATATGCGCGC GCCGCGGCTG
CTCTGGCGGC AGCTCGGCCC CTGGCGCTTC GCAGGCTTCC AGGTGATGTT CCTCGGCTCG
ATCTCGCAGA CCCTGCTCGC GCCGGTGCTC TGGTCCTTCT GGCTGCTGGC GCTCGGCCTG
CCGCATCCGG TGGCGCCGCT CGTGCCCGAG CCGCTGCTCT GGTCGATGAT CGGCCTTCTC
ATCGGATCGG AGGGCACCGC CATTGCCATG GGCATCCTCG CCCTGCGGCA GACCCGGCAC
CGGCTGAACC CGCTCTGGGT GCCGACCCTG CATCTCTACA ACCCGCTCGC CACCTTCGCG
GCCTACAAGG CGCTGTGGGA GCTCCTGCGC GCGCCCTTCT ACTGGGACAA GACCTGCCAC
GGGGTCTTCG ACGCCCAGAC CCGCGGCCGC CCTCTCCTGC AGCCCGCCTG A
 
Protein sequence
MPALPDSLPQ IRPGRAPAAP RPLPSPAEAA EPLGVMLLRE GHLAPHRIMA ALSHGGRPSA 
PLADVLLAEG ALSEDEILAM MARRSGLPVL DPAAERPDPR LIDRLGVRDC LREGLLPLRD
TGSAVLLAAA APESFRRHRP RLEELFGTVI PALATRSSIE AALQEVRADA IGTAAELRVA
PEESCRDWRT GQMTRFAALA GLALAAGLAL APGLVLLALT AWALLALACG TALRLATAVA
SLRRPPPEPE SPPLLHLPMV SIIVALYREE DIAGRLVARL GRLDYPHDRL EILLVVEEAD
RRTRRALLEA RLPPWMRIVV SPKGAIRTKP RALNVALDHC RGSIVGVYDA EDAPEPDQIR
RVVEGFSRRG SHVACLQGRL DYYNPRTNWL SRCFTIEYAA WFRLMLPGLD RLGLVVPLGG
TTLFFRRAAL EELGAWDAHN VTEDADLGIR LARHGYRTDL IDTVTAEEAN CRAIPWIKQR
SRWIKGFMMT WAVHMRAPRL LWRQLGPWRF AGFQVMFLGS ISQTLLAPVL WSFWLLALGL
PHPVAPLVPE PLLWSMIGLL IGSEGTAIAM GILALRQTRH RLNPLWVPTL HLYNPLATFA
AYKALWELLR APFYWDKTCH GVFDAQTRGR PLLQPA