| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0504 |
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| Symbol | |
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| ID | 4897135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 528073 |
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| End bp | 529854 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640111088 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001042392 |
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| Protein GI | 126461278 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC AGGCGATCTT CCTTCTGTGG CTGGGGGCGG CCCTGCCTGC GGCGGCTCCG
GTCTGGGCGC AGGAGCAGAG CGAGACGCGG GTCTGGGTGC AGATCGAGGC CCGGCCCACG
GAGGCCGAGG CCGACGAGCG CGCCCGGGCC TATGCCGAGG TCTTCCCCGA CGTGGCAGGC
TACCGGCTGT CTTCGGGATG GTATGCGATC GTGCTCGGCC CCTACGGGAC GGACGTGGCG
CGGCTGCGGC TGCAGGATCT GCTGGCCGCG GGCATGATCC CGCGGGACAG TTTCATCGCC
GACGGGCGCG CCTTCCGCGA GCCCTTCCTC GCCCCGGGCG AGCTGCCCCC GGCCCCCGAT
GCGGAAGCTC TGGCGGTGCC CGGCCCCGAG ATGCTGCCCG AGGACGAGCC ACTAGATGCG
CCCCCGGCCC TTGAGGCCGC GCCCGCCCCC CTGCCGGACG AGACCCCCGC CGAGGCACGG
CGGTCCGAGG CGCTTCTCAT CGCCTCCGAG CGGCAGGAGT TGCAGGCCGC CCTGCAATGG
TTCGGCTTCT ACGGTGCGGC CATCGACGGG GCCTTCGGCC CGGGCACCCG CGCCTCGATG
GCGGCCTGGC AGGAGGCCGA GGGCGCCGAG GCCACCGGCA TCCTGACCGC GCGCCAGCGG
GCCGAGCTTC TCGACCGCTA CGGGCGGGCG CAGGCGGAGC TCGGGCTCGA GACGGTGACC
GAAGACGAGG CGGGCATCCG CATCACCCTG CCCACCGCTC TCGTCGCCTT CGACCGCTAC
GACCCGCCCT TCGTCCATTA CGCGCCGAAG GACGGATCGG GCGTGCAGGT CATGCTGATC
TCGGAGCCGG GCGACCGGGG CGCGCTCTAC GGGCTCTACG ACATCCTCCA GACGCTGGAA
GTGGTGCCGC CCGAAGGCAC CCGCAGCCGG ACGGAGACCG GCTTCACCAT CGAGGGCCGC
TCGGCCGATC TGGCGAGCTA CACCCATGTC GAGCTCGCCG GGGGGCTCCT CAAGGGCTAC
ATGCTGGTCT GGCATCCGGG CGACGACGAG CGGATGGCGC GCGTGCTGAC GGCGATGCAG
TCGAGCTTCC GCCCCTTCGG CGACCGGGCG CTCGATCCGG GCATGGTCGA GATGACCGAA
GAGCAGCGGC GGGGAATGCT GGCCGGGCTC GAGGTGCGCA AGCCGCGCCA GTCGCGCTCG
GGGATCTTCG TCGATCCGAA AGGCGCCGTC CTCACGACGG CCGAGGCAGT GGCGGGCTGC
GGGCGCGTGA CCATCGACCG CGAGCACGAG GCCAAGGTGG TGGCGACCGA CACGGCCCTC
GGCATGGCGC TCCTGCGGCC GGTTCATCCG ATGGCGCCCC GCGTCACCGC GAGCTTCCGC
AGCACCGAGG CGCGGCTCGG CTCGCCCGTG GCGGTGGCGG GCTATCCCTA CGGGGAGGCG
CTGCCTGCGC CCACGCTCAC CTTCGGGGCG CTCGATGCGC TGACGGGGCT CGAGGGCGAG
GCCGACCTGC GCCGTCTCCG CCTTGCGTCG CGGCCGGGCG ACGCGGGCGG GCCGGTGCTC
GACGGGTCGG GCGCGGTCTT GGGGATGCTG GTGGCGCCCG AGACGGGCGA GCGGCGGCTG
CCCGACGAGG TCTCCTTCGC CCTCGCCCCG GCCGCGCTCA CCGCGCGCCT TTCGGAGGCG
GGCATCGAGC CGCGCCGCGC CGAGGGCAGC GGCGCCCTCG CCCCCGAGGA TCTGGTCCGG
CTGGGCGACG GCATGACCGC CCTCGTCTCC TGCTGGGACT GA
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| Protein sequence | MMKQAIFLLW LGAALPAAAP VWAQEQSETR VWVQIEARPT EAEADERARA YAEVFPDVAG
YRLSSGWYAI VLGPYGTDVA RLRLQDLLAA GMIPRDSFIA DGRAFREPFL APGELPPAPD
AEALAVPGPE MLPEDEPLDA PPALEAAPAP LPDETPAEAR RSEALLIASE RQELQAALQW
FGFYGAAIDG AFGPGTRASM AAWQEAEGAE ATGILTARQR AELLDRYGRA QAELGLETVT
EDEAGIRITL PTALVAFDRY DPPFVHYAPK DGSGVQVMLI SEPGDRGALY GLYDILQTLE
VVPPEGTRSR TETGFTIEGR SADLASYTHV ELAGGLLKGY MLVWHPGDDE RMARVLTAMQ
SSFRPFGDRA LDPGMVEMTE EQRRGMLAGL EVRKPRQSRS GIFVDPKGAV LTTAEAVAGC
GRVTIDREHE AKVVATDTAL GMALLRPVHP MAPRVTASFR STEARLGSPV AVAGYPYGEA
LPAPTLTFGA LDALTGLEGE ADLRRLRLAS RPGDAGGPVL DGSGAVLGML VAPETGERRL
PDEVSFALAP AALTARLSEA GIEPRRAEGS GALAPEDLVR LGDGMTALVS CWD
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