Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0479 |
Symbol | |
ID | 4896203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 499427 |
End bp | 500098 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640111063 |
Product | SURF1 protein |
Protein accession | YP_001042367 |
Protein GI | 126461253 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCC GGATGATCCT GCCCCTTCTC TTCGGCCTGA TCGGGGCGGC GATCCTCGTG TCGCTCGGCC TCTGGCAGGT GCAGCGCCTC CAGTGGAAGG AGGGGGTGCT GGCCGACATC GAAGCCCGCG TCGCGGCCCC GCCCGTGACC CTGCCCGAAG CGCCCGAAGC CGCGCGCGAC CGCTATCTGC CCGTCACCGT CTCGGGCCGC TTCACCGGCG AGCACATCGA CGTGCTCACC AGCCGCAAGG ACAGGGGCGC GGGCTACCGG GTGATCTCGG TCTTCGAGAC CGACGAGGGA CGCCGCATCC TGATCGACCG GGGCTTCCTT CCGCAGGAGG ATCGCGGCCT GCCGCGCACG GCGGTGGGGG CGGGACTGAC CGGCAACCTC GCCTGGCCCG CGGAGGTGGA CAGCTTCACC CCGTCGCCCG ATCCGGTCTC CGGCATCTGG TTCGCCCGCG ACGTGCCCGC CATGGCCGAG GCGCTCTCGA CCGAGCCGGT CCTCGTGGTG GCCGCCACCC CCACCGGCGA CGGGATCGAC CCCTGGCCGA TCGGCACCGA AGGCATTCCG AACGACCATC TCGGCTATGC GGTGACGTGG TTTTCGCTTG CCGTTCTCTG GCTGGGGATG ACAGTCCTTC TGCTCTGGCG TATCAGGCGT CGGATGGAAT GA
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Protein sequence | MIRRMILPLL FGLIGAAILV SLGLWQVQRL QWKEGVLADI EARVAAPPVT LPEAPEAARD RYLPVTVSGR FTGEHIDVLT SRKDRGAGYR VISVFETDEG RRILIDRGFL PQEDRGLPRT AVGAGLTGNL AWPAEVDSFT PSPDPVSGIW FARDVPAMAE ALSTEPVLVV AATPTGDGID PWPIGTEGIP NDHLGYAVTW FSLAVLWLGM TVLLLWRIRR RME
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