Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0448 |
Symbol | |
ID | 4896476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 464873 |
End bp | 465529 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640111032 |
Product | heme exporter protein CcmB |
Protein accession | YP_001042336 |
Protein GI | 126461222 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCGC TTCTCCTCAG GGACCTGCGG CTCGCTCTGC GGGCGGGCGG CGGCTTCGGC CTGGGCCTCG CCTTCTTCCT GCTGGTGGCC GTCCTCGTGC CGCTCGGCGT CGGGCCCGAG CCTGCGACGC TGGCGAAGAT CGCCCCCGGC ATCCTCTGGG TCGGCGCGCT CCTGGCCTGT CTTCTCTCGC TCGACCGGAT CTTCGCGCTC GATCACGAGG ACGGATCGCT CGATCTCCTC GCCACCGCTC CGATCCCGCT CGAGGGCGTG GTGGCGGTGA AGGCCTGCGC GCACTGGCTC GTCACCGGCC TGCCGCTGAC GCTGGTCTCG CCCCTGCTCG GGCTCCTGAT GAACCTGCCG GCCGAGGGCT ATCCGCTGCT TCTGGCCTCG CTCGCCATCG GCACGCCGGC GCTCTCGGTG ATCGGCACCT TCGGCGCGGC CCTCACCGTC GGGCTGAAGC GGGGCGGGCT CCTGCTCAGC CTCCTCGTGC TGCCGCTCTA TGTGCCGACC CTCGTCTTCG GGGCCGAGGC GGTGCGGCGC GGTGCGCTCG GCATGGATGT CGCGACCCCG TTCCTCCTCC TCGGAGGCAT CACGGCGGGT GTCGCGGCCC TGCTACCTTT CGCCTCAGCA GCCGCCGTTC GGATAAATCT CCGGTAA
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Protein sequence | MIALLLRDLR LALRAGGGFG LGLAFFLLVA VLVPLGVGPE PATLAKIAPG ILWVGALLAC LLSLDRIFAL DHEDGSLDLL ATAPIPLEGV VAVKACAHWL VTGLPLTLVS PLLGLLMNLP AEGYPLLLAS LAIGTPALSV IGTFGAALTV GLKRGGLLLS LLVLPLYVPT LVFGAEAVRR GALGMDVATP FLLLGGITAG VAALLPFASA AAVRINLR
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