| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0445 |
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| Symbol | secF |
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| ID | 4896070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 462673 |
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| End bp | 463647 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640111029 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001042333 |
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| Protein GI | 126461219 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.222875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCC GCCTCAAACT CTGCCCCGAA AAGACGAACA TCGACTTCTT CTGGGCCGCG
CCCGTCACCT TCGGCTTCTC GGTCTTCCTG ATGGCGGCCT CGCTCGTGGC CTGGCTGACG
CTGGGGCTGA ATTTCGGGAT CGACTTCCGC GGCGGCACGA CGATCCGGAC GGAATCGACA
CAGGCCGTGG ATGTGGCCGC CTATCGCGCC GCCCTCGAGG GGCAGGATCT TGGCGACATC
TCGATCACCG AGGTCTTCGA TCCCGGCTTC CGCGCGGATC AGCACGTCGC CATGGTCCGG
ATCGGCGCAC AGGACGCGAC CCAGTCGATC ACGCCCGAGC AGATCGGGCA GGTCGAGGAG
GCGCTGAAGA CCGTCGATCC GTCCATCACC TTCCCGTCCG TCGAGTCGGT GGGGCCGAAG
GTCTCGGGCG AGCTGATCCG GTCGGCGATC CTGGCGGTCG CCGCCGCCTG CGCGGGCATC
GCCGTCTATA TCTGGCTCAG GTTCGAATGG CAGTTCGCCC TGGGCTCGGT GGCCGCATTG
ATCCACGACG TGCTGGTGAC GATCGGGGTC TTCGCGCTCT TCCAGATCAA GTTCGACCTG
ACGACGGTCG CGGCCCTCCT CACCGTCCTT GGCTATTCGA TCAACGACAC GGTGGTGGTG
TTCGACCGGC TGCGCGAGAA CCTTGTCAAA TACAAGACCA TGCCGCTCCG CGACGTGATG
AACCTCTCGG TCAACGAGAC GCTGAGCCGG ACGATCATGA CGCTGATGAC CACACTCATC
GCGCTCGTGT CGCTTCTCGT CTTCGGCGGC GACGTGATCC GCGGCTTCGT CTTCGCCATC
ACCTTCGGCG TGGTGATCGG GACCTATTCC TCGGTCTACA TGGCCAAGAA CATCGTGCTC
TATCTCGGCG TGGACCGGGG CGGGCCGAAG AAGGACAGCA AGGCGGGCAC CCAGTTCGCC
AATAACGACG CCTGA
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| Protein sequence | MAFRLKLCPE KTNIDFFWAA PVTFGFSVFL MAASLVAWLT LGLNFGIDFR GGTTIRTEST
QAVDVAAYRA ALEGQDLGDI SITEVFDPGF RADQHVAMVR IGAQDATQSI TPEQIGQVEE
ALKTVDPSIT FPSVESVGPK VSGELIRSAI LAVAAACAGI AVYIWLRFEW QFALGSVAAL
IHDVLVTIGV FALFQIKFDL TTVAALLTVL GYSINDTVVV FDRLRENLVK YKTMPLRDVM
NLSVNETLSR TIMTLMTTLI ALVSLLVFGG DVIRGFVFAI TFGVVIGTYS SVYMAKNIVL
YLGVDRGGPK KDSKAGTQFA NNDA
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