Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0396 |
Symbol | |
ID | 4895924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 409660 |
End bp | 410448 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640110980 |
Product | ABC transporter related |
Protein accession | YP_001042284 |
Protein GI | 126461170 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.254108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAG CCATCGAACG CGCCATCGAC CGCAGCCACA TGCAGGTGAG CGACGAGGTC GCCATCCAGA TCAGCCAGAT GAACAAGTGG TACGGCAGTT TCCACGTCCT GCGCGACGTG AACATGACCG TCCACAAGGG CGAGCGGATC GTGATCTGCG GCCCCTCCGG CTCGGGGAAA TCCACCCTGA TCCGCTGCAT CAACCGCCTC GAGGAGCACC AGTCCGGCCA GATCGTCGTG GACGGGATCG AGCTCACCTC GGACCTCAAG AACATCGACA AGGTGCGCTC CGAGGTCGGG ATGGTGTTCC AGCACTTCAA CCTCTTCCCG CATCTGACGA TCCTGGAAAA CTGCACCCTC GCGCCGATCT GGGTCCGCAA GACCCCGAAG AAGGAGGCCG AGGAGGTGGC GATGCACTAC CTCAAGAAGG TCAAGATCCC CGAGCAGGCG CACAAATATC CGGGCCAGCT CTCGGGCGGA CAGCAGCAGC GGGTGGCCAT CGCGCGCTCG CTCTGCATGA AGCCCCGCAT CATGCTCTTC GACGAGCCGA CCTCGGCGCT CGACCCCGAG ATGATCAAGG AGGTGCTCGA CACGATGATC GAGCTGGCGG AAGAGGGGAT GACCATGCTC TGCGTGACCC ACGAGATGGG CTTCGCGCAG GCGGTGGCGA ACCGGGTGAT CTTCATGGAC CAGGGCCAGA TCGTCGAGCA GAACGAGCCG GGCGAGTTCT TCCGCAACCC GAAGTCGGAA CGCACGAAGC TCTTCCTCAG CCAGATCCTC GGACACTGA
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Protein sequence | MSEAIERAID RSHMQVSDEV AIQISQMNKW YGSFHVLRDV NMTVHKGERI VICGPSGSGK STLIRCINRL EEHQSGQIVV DGIELTSDLK NIDKVRSEVG MVFQHFNLFP HLTILENCTL APIWVRKTPK KEAEEVAMHY LKKVKIPEQA HKYPGQLSGG QQQRVAIARS LCMKPRIMLF DEPTSALDPE MIKEVLDTMI ELAEEGMTML CVTHEMGFAQ AVANRVIFMD QGQIVEQNEP GEFFRNPKSE RTKLFLSQIL GH
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