Gene Rsph17029_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0396 
Symbol 
ID4895924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp409660 
End bp410448 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID640110980 
ProductABC transporter related 
Protein accessionYP_001042284 
Protein GI126461170 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.254108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CCATCGAACG CGCCATCGAC CGCAGCCACA TGCAGGTGAG CGACGAGGTC 
GCCATCCAGA TCAGCCAGAT GAACAAGTGG TACGGCAGTT TCCACGTCCT GCGCGACGTG
AACATGACCG TCCACAAGGG CGAGCGGATC GTGATCTGCG GCCCCTCCGG CTCGGGGAAA
TCCACCCTGA TCCGCTGCAT CAACCGCCTC GAGGAGCACC AGTCCGGCCA GATCGTCGTG
GACGGGATCG AGCTCACCTC GGACCTCAAG AACATCGACA AGGTGCGCTC CGAGGTCGGG
ATGGTGTTCC AGCACTTCAA CCTCTTCCCG CATCTGACGA TCCTGGAAAA CTGCACCCTC
GCGCCGATCT GGGTCCGCAA GACCCCGAAG AAGGAGGCCG AGGAGGTGGC GATGCACTAC
CTCAAGAAGG TCAAGATCCC CGAGCAGGCG CACAAATATC CGGGCCAGCT CTCGGGCGGA
CAGCAGCAGC GGGTGGCCAT CGCGCGCTCG CTCTGCATGA AGCCCCGCAT CATGCTCTTC
GACGAGCCGA CCTCGGCGCT CGACCCCGAG ATGATCAAGG AGGTGCTCGA CACGATGATC
GAGCTGGCGG AAGAGGGGAT GACCATGCTC TGCGTGACCC ACGAGATGGG CTTCGCGCAG
GCGGTGGCGA ACCGGGTGAT CTTCATGGAC CAGGGCCAGA TCGTCGAGCA GAACGAGCCG
GGCGAGTTCT TCCGCAACCC GAAGTCGGAA CGCACGAAGC TCTTCCTCAG CCAGATCCTC
GGACACTGA
 
Protein sequence
MSEAIERAID RSHMQVSDEV AIQISQMNKW YGSFHVLRDV NMTVHKGERI VICGPSGSGK 
STLIRCINRL EEHQSGQIVV DGIELTSDLK NIDKVRSEVG MVFQHFNLFP HLTILENCTL
APIWVRKTPK KEAEEVAMHY LKKVKIPEQA HKYPGQLSGG QQQRVAIARS LCMKPRIMLF
DEPTSALDPE MIKEVLDTMI ELAEEGMTML CVTHEMGFAQ AVANRVIFMD QGQIVEQNEP
GEFFRNPKSE RTKLFLSQIL GH