| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0394 |
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| Symbol | |
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| ID | 4895729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 407055 |
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| End bp | 408317 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640110978 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001042282 |
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| Protein GI | 126461168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.108285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG TCGCGGATGC GCCGAAGGAC TCCTTTCGGC TCAGCATGTT GCTATACGAT
ACGCGCTATC GTTCTCTCAC GATCCAGGTC TTCGTCTTCT TCCTGTTCAT GGCCGGCGCC
GCCTGGCTTG TGGACAATAC GATGCGCAAC CTCGAGGCGC TCGGGAAGGA CTTCGACTTC
GGCTTTCTCT GGAACCGCGC GGGCTACGAC ATCAGCCAGC GGCTGGTGGA CTATACCAAC
GACAGCACCC ATGGCCGGGC CATGCTGGTG GGGCTGCTCA ACACGCTGCT GATCGCGCTG
CTAGGCTGCA TGGCGGCCAC CGTGATCGGC GTCCTCGTGG GCGTGCTCCG GCTGTCGCGG
AACTGGATCG TCGGGCGGCT GATGACCGTC TATGTCGAAG TCTTCCGCAA CGTGCCGCTG
CTCCTCTGGA TCCTCCTGAT CTATGCGGTC TTCAGCGAGG CCACGCCCGC GCCCAACGCC
TTCCGCCCGA ACCCCGAGAC CGGGATCGCG GACCGCTCGA TGTTCCTCGA CGCGATTGCG
GTCACGAACC GCTACACCGC CCTGCCGAAC CCGGTCTTCA GCCGCGAGCT GGGCTGGCTC
GACCTCGGCC TCTTCTACGT CAACATGGAT GTGCTGGCGG TGATCGGGGC CATCATCGCG
GGCTGGTTCA TCAACCGCAG CGTCAAGGCG CGCGCCACCC GCATTCAGGA GGCCACAGGC
GAGCGTCCGG CGACCTGGTG GTCGTCGCTG CTCCTGCTCG TCGGACTGCC GGTGGCGGTG
CTGCTGGCGC TCGGCTTCCA TCTCGAGTTC CCCGAGCTCC GCGGCTTCAA CTTCGTCGGC
GGCCTGAACG TCTCGAACTC CTTCATGGCG CTCTGGCTGG CGCTCTCGCT CTATACCGGC
GCCTTCATCG CCGAGATCGT GCGGGGGGGC ATCCTCGCCG TCTCGCGCGG CCAGTCCGAG
GCGGCCTTCG CGCTCGGCCT GCGGCCGGGG CGGACGATGA ACCTCGTGAT CCTGCCGCAG
GCGCTCCGGG TCATCATCCC GCCGCTCATC TCGCAATATC TGAACCTCAC GAAGAACTCC
TCGCTGGCCA TCGCCGTGGG CTATCTCGAC CTCCGCGGCA CGCTGGGCGG CATCACGCTG
AACCAGACCG GGCGCGAGCT CGAGTGCGTG CTGCTGATGA TGCTGATCTA TCTCGCCATC
AGCCTCGTCA TTTCGGGGGT GATGAACGTC TACAACTCGG CCGTGAAGCT GAAGGAGCGC
TGA
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| Protein sequence | MANVADAPKD SFRLSMLLYD TRYRSLTIQV FVFFLFMAGA AWLVDNTMRN LEALGKDFDF
GFLWNRAGYD ISQRLVDYTN DSTHGRAMLV GLLNTLLIAL LGCMAATVIG VLVGVLRLSR
NWIVGRLMTV YVEVFRNVPL LLWILLIYAV FSEATPAPNA FRPNPETGIA DRSMFLDAIA
VTNRYTALPN PVFSRELGWL DLGLFYVNMD VLAVIGAIIA GWFINRSVKA RATRIQEATG
ERPATWWSSL LLLVGLPVAV LLALGFHLEF PELRGFNFVG GLNVSNSFMA LWLALSLYTG
AFIAEIVRGG ILAVSRGQSE AAFALGLRPG RTMNLVILPQ ALRVIIPPLI SQYLNLTKNS
SLAIAVGYLD LRGTLGGITL NQTGRELECV LLMMLIYLAI SLVISGVMNV YNSAVKLKER
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