Gene Rsph17029_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0389 
Symbol 
ID4895188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp402200 
End bp403513 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content69% 
IMG OID640110973 
Productrecombination factor protein RarA 
Protein accessionYP_001042277 
Protein GI126461163 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC TCTTCGACCG AGAGCCTGCG CCCCCGCAGC CCGATGCCCC CCGACCGCTG 
GCCGACCGGC TGCGGCCGAA GTCGCTGGCC GAGGTGATCG GGCAGGGCAA GGTCCTGTCG
CCCGACGGGC CTCTGGGCGC GATGCTGGCC TCGGGCAGCC TGTCGTCGCT GATCCTCTGG
GGACCGCCGG GCGTGGGCAA GACCACCATC GCCCGGCTGC TCGCGAAGGA GACCGACCTC
GCCTTCGTGC AGATCTCGGC GATCTTCACC GGCGTGCCGG ACCTTCGGAA GGTGTTCGAG
GCGGCGAAGC TCCGGCGGGC GAACGGGCAG GGGACGCTCC TGTTCGTCGA TGAGATCCAC
CGGTTCAACA AGGCCCAGCA GGATGGCTTC CTGCCGCACA TGGAGGACGG GACCATCCTC
CTCGTGGGGG CGACCACCGA GAACCCCTCT TTCGAGCTGA ACGCGGCGCT CATGTCGCGG
GCGCAGGTGA TCGTGCTCGA GCGGCTGAGC CTCGCCGATC TCGAGCGTCT GGCCCAGCGG
GCCGAGCACG AGACGGGGCG GGCTCTGCCG CTCGACGGCC CCGCGCGCGA GGCGCTGCTG
GAGATGGCCG ACGGCGACGG AAGGGCGCTT CTGAACCTCG TCGAGCAGGT GATGGCTTGG
AAGGTCAAAG GTCCGCTCGA CCGCGACCAG CTTGCCACGC GCCTCATGCG CCGGGCCGCG
AAATACGACA AGTCGGGCGA GGAGCATTAC AACCTCATCT CGGCCCTGCA CAAATCCGTG
CGCGGGTCCG ACCCCGATGC CGCGCTCTAC TGGTTCGCGC GGATGCTCGA GGGCGGCGAG
GACCCGCGCT TCCTCGCCCG GCGCATCACG CGGATGGCGG TCGAGGACAT CGGGCTCGCC
GATCCGCAGG CGCAGGGGAT CTGCCTCGAA GCCTGGGCCA CCTACGAGCG GCTGGGCTCG
CCGGAGGGCG AGCTCGCGCT GGCGGAGGCG CTGGTCTATC TGGCGCTCAG CCCGAAGTCG
AACGCGGTCT ACACCGCCTA CAAGGCCGCG CGGGCGGCGG CGAAGCAGAC CGGCTCCGAG
CCGCCGCCGA AGCATATCCT GAACGCGCCG ACGAAGATGA TGAAGGAGAT CGGCTACGGC
TCGGGCTACC AGTACGACCA CGATGCCGAG GACGGCTTCT CGGGCCAGAA CTACTTCCCC
GAGAGCATGA AGCGCCCTGT CTGGTATCTG CCGCAGGAGC GCGGTTTCGA GCGGGAACTG
AAGAAGCGCA CCGACTATTT CTCCAAGCTC CGCGCCAAGC GGCAGGGCGG TTGA
 
Protein sequence
MSDLFDREPA PPQPDAPRPL ADRLRPKSLA EVIGQGKVLS PDGPLGAMLA SGSLSSLILW 
GPPGVGKTTI ARLLAKETDL AFVQISAIFT GVPDLRKVFE AAKLRRANGQ GTLLFVDEIH
RFNKAQQDGF LPHMEDGTIL LVGATTENPS FELNAALMSR AQVIVLERLS LADLERLAQR
AEHETGRALP LDGPAREALL EMADGDGRAL LNLVEQVMAW KVKGPLDRDQ LATRLMRRAA
KYDKSGEEHY NLISALHKSV RGSDPDAALY WFARMLEGGE DPRFLARRIT RMAVEDIGLA
DPQAQGICLE AWATYERLGS PEGELALAEA LVYLALSPKS NAVYTAYKAA RAAAKQTGSE
PPPKHILNAP TKMMKEIGYG SGYQYDHDAE DGFSGQNYFP ESMKRPVWYL PQERGFEREL
KKRTDYFSKL RAKRQGG