Gene Rsph17029_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0376 
SymbolrplF 
ID4895918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp392807 
End bp393340 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID640110960 
Product50S ribosomal protein L6 
Protein accessionYP_001042264 
Protein GI126461150 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.667963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTA TCGGCAAGAA ACCCGTACCG CTGCCGAAAG GCGTGACGGC CTCGATCTCG 
GGCCAGTCGA TCGAAGTGAA GGGCCCGAAA GGCACCCGCA GCTTCTCGGC GACCGACGAC
GTGACCCTCG CGCTGGACGA AGGTTCGGTG AAGGTGACCC CGCGCGGCAC CTCGAAGCGT
GCCCGTCAGC AATGGGGCAT GGTGCGGTCG CAGGTGGAAA ACCTCGTGAC CGGCGTCACC
AGCGGCTTCA AGAAGGAGCT GGAGATCTCG GGCGTGGGTT ACCGCGCGCA GATGGCCGGC
AACGTGCTGA AGCTCTCGCT CGGCTATTCG CACGACGTCA ACTTCGAGGT TCCGGCGGGC
GTCACCGTCA CCACCCCGAA GCAGACCGAG ATCACGGTCG AAGGCATTGA CCAGCAGCTG
GTCGGCCAGG TGGCGGCGAA CATCCGCGAG TGGCGGCGTC CCGAGCCCTA CAAGGGCAAG
GGCATCCGCT ACAAGGACGA GTTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA
 
Protein sequence
MSRIGKKPVP LPKGVTASIS GQSIEVKGPK GTRSFSATDD VTLALDEGSV KVTPRGTSKR 
ARQQWGMVRS QVENLVTGVT SGFKKELEIS GVGYRAQMAG NVLKLSLGYS HDVNFEVPAG
VTVTTPKQTE ITVEGIDQQL VGQVAANIRE WRRPEPYKGK GIRYKDEFIF RKEGKKK