Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0367 |
Symbol | rpsC |
ID | 4895785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 388908 |
End bp | 389624 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640110951 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001042255 |
Protein GI | 126461141 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTCAGA AGGTCAATCC GATCGGCATG CGCCTTCAGG TCAACCGCAC CTGGGACAGC CGCTGGTTCG CCGAGTCGAA GGACTACGGC AACCTGCTGC TGGAAGACCT GAAGATGCGC GAGTTCATCC ACGACTACGC CAAGCAGGCC GGCGTGTCGA AGGTGATCAT CGAGCGTCCG CACCGCAAGT GCCGCGTGAC GATCCACACC GCCCGTCCGG GCGTGATCAT CGGCAAGAAG GGCGCGGACA TCGAGACGCT GCGCAAGAAG CTGTCGGCCT TCACGAAGTC CGAGCTTCAC CTGAACATCG TCGAGATCCG CAAGCCCGAG CTTGACGCCC AGCTGGTGGC CGAGTCGATC GCCCAGCAGA TGGAGCGCCG GGTGTCCTTC CGCCGCGCCA TGAAGCGCGG CGTGCAGAAC GCCATGCGGA TCGGTGCCCT CGGCATCCGG GTCAACGTGT CGGGCCGCCT CGGTGGCGCC GAGATCGCCC GGACCGAATG GTATCGCGAG GGTCGGGTGC CGCTGCACAC GCTGCGCGCC GACATCGACT ACGCGACCTC GGAAGCCACG ACCCCTTACG GGATCATCGG GGTGAAGGTC TGGATCTTCA AGGGCGAGAT CCTCGAGCAC GATCCGCAGG CGCACGACCG CCGGCATTCG GAAGCTCAGG AAGGTGCCGC ACCGCGGCCG CCGCGTCGCG ATCGCGAACG CGCGTAA
|
Protein sequence | MGQKVNPIGM RLQVNRTWDS RWFAESKDYG NLLLEDLKMR EFIHDYAKQA GVSKVIIERP HRKCRVTIHT ARPGVIIGKK GADIETLRKK LSAFTKSELH LNIVEIRKPE LDAQLVAESI AQQMERRVSF RRAMKRGVQN AMRIGALGIR VNVSGRLGGA EIARTEWYRE GRVPLHTLRA DIDYATSEAT TPYGIIGVKV WIFKGEILEH DPQAHDRRHS EAQEGAAPRP PRRDRERA
|
| |