| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0353 |
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| Symbol | rpoB |
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| ID | 4897688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 371221 |
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| End bp | 375354 |
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| Gene Length | 4134 bp |
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| Protein Length | 1377 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640110937 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001042241 |
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| Protein GI | 126461127 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA GCTACGTTGG CCAGAAACGT ATCCGCAGGT ACTACGGCAA GATCCGCGAA
GTGCTGGAGA TGCCGAACCT GATCGAGGTT CAGAAATCCT CCTACGATCT GTTCCTGAAG
TCGGGCGACG GCCCGAAGGC GGCCGATGGC GAAGGCATCC AGGGCGTCTT CCAGTCGGTC
TTCCCGATCA AGGACTTCAA CGAGACCGCC GTGCTCGAGT TCGTGAAATA CGAGCTCGAA
AAGCCGAAAT ATGACGTGGA CGAGTGCCAG CAGCGCGACA TGACCTATGC CGCGCCGCTG
AAGGTGACGC TGCGCCTGAT CGTGTTCGAT GTCGACGAGA CCACGGGCGC CCGCTCGGTC
AAGGACATCA AGGAGCAGGA CGTCTACATG GGCGACATGC CCCTGATGAC CGCCAACGGC
ACGTTCATCG TGAACGGCAC CGAGCGCGTG ATCGTCAGCC AGATGCACCG CAGCCCCGGC
GTGTTCTTCG ACCACGACAA GGGCAAGACC CACTCCTCGG GCAAGCTCCT GTTCGCCTGC
CGCATCATCC CCTACCGCGG CTCGTGGCTG GACTTCGAAT TCGACGCGAA GGACATCGTC
TTCGCGCGCA TCGACCGTCG CCGGAAGCTG CCGGTGACGA CGCTGCTCTA TGCCCTCGGC
ATGGATCAGG AAGGCATCAT GGATGCCTAT TACGAAACCG TGAACTTCAA GCATCAGAAG
AACCGCGGCT GGGTCACCCG GTTCTTCCCC GAGCGCGTGC GCGGCACCCG TCCCACCTAC
GATCTCGTGG ATGCGGCCAC CGGCGAGGTC ATCCTGAAGG CGGGCGAGAA GGCCACGCCG
CGGATGGTCA AGAAGTGGAT CGACGAGGCT CAGATCACCG AGCTTCTGGT GCCGTTCGAC
CATATCGTCG GCCGCTATGT CGCGCAGGAC ATCATCAACG AGGAAACCGG CGAGATCTGG
GTCGAAGCCG GTGACGAACT CACGATGGAG TACGACCGCG ACGGCGAGGT GAAGGGCGGC
ACGCTGAAGC TGCTGCTCGA TCAGGGCATC ACCGACATCC CGGTGCTCGA CATCGACAAT
GTCAACGTCG GCCCCTACAT CCGCAACACG ATGGCGGCGG ACAAGAACAT GGGCCGCGAC
ACCGCGCTCA TGGACATCTA CCGCGTCATG CGTCCGGGTG AGCCGCCGAC CGTCGAGGCG
GCGTCGAACC TGTTCGACAC GCTGTTCTTC GACAGCGAGC GCTATGACCT CTCGGCCGTC
GGCCGCGTGA AGATGAACAT GCGTCTCGAC CTCGGCAAGC CCGACACCCA GCGCACGCTC
GACCGCGACG ACATCATCGC CTGCATCAAG GCGCTGACCG AGCTGCGCGA CGGCAAGGGC
GAGATCGACG ACATCGACCA CCTCGGCAAC CGCCGGGTGC GCTCGGTGGG CGAGCTCATG
GAGAACCAGT ACCGCGTCGG TCTCCTGCGC ATGGAGCGCG CGATCAAGGA ACGCATGTCC
TCGGTCGAGA TCGACACGAT CATGCCGCAG GATCTGATCA ACGCGAAGCC CGCGGCGGCC
GCGGTGCGCG AGTTCTTCGG CTCGTCGCAG CTCTCGCAGT TCATGGACCA GACCAACCCG
CTGTCGGAAG TCACCCACAA GCGGCGTCTC TCGGCCCTCG GGCCGGGCGG TCTGACCCGC
GAGCGCGCGG GCTTCGAGGT GCGCGACGTT CACCCGACCC ACTATGGCCG GATGTGCCCG
ATCGAGACGC CGGAAGGTCA GAACATCGGC CTCATCAACT CGCTCGCGAC CTTCGCCCGC
GTGAACAAGT ACGGCTTCAT CGAGACCCCC TATCGCAAGG TGGTCGAGGG CGCCGTGACC
GACGACGTGG TCTACATGTC GGCCACCGAG GAGATGCGGC ACACCGTGGC GCAGGCCAAC
GCGCAGCTCG ATGAGGAGGG CCGGTTCGTC TCCGACCTGA TCTCGTCGCG CAAGGCGGGC
GAGTTCATGC TGAACCCGCC GGATGCCATC GACCTGATCG ACGTGTCGCC GAAGCAGCTC
GTCTCGGTTG CGGCCTCGCT GATCCCGTTC CTCGAGAACG ACGACGCGAA CCGCGCGCTG
ATGGGCTCGA ACATGCAGCG TCAGGCGGTG CCGCTCCTGC AATCCGACGC GCCCTTCGTG
GGCACGGGGA TCGAGGCCGT GGTGGCGCGT GACTCCGGGG CCGCCATCAT GGCGCGGCGC
GCCGGCGTGA TCGATCAGGT GGATGCGACG CGTATCGTCG TGCGCGCCAC CGAGATGCTG
GAGCCGGGCG AGCCGGGCGT CGACATCTAC CGTCTGCGCA AGTTCAAGCG CTCGAACCAG
TCGTCCTGCA TCAACCAGCG CCCGCTGGTG AAGGTGGGTG ACGTGGTGCA CCGTGGCGAG
GTGGTGGCCG ACGGCCCCTG CACCGACATG GGCGAGCTGG CCCTCGGCCG GAACGTGATC
GTGGCCTTCA TGCCGTGGAA CGGCTACAAC TACGAGGACT CGATCCTGAT CTCCGAGCGG
ATCCTCCGCG ACGACGTCTA TACCTCGATC CATATCGAGG AATACGAGGT CGCGGCGCGG
GATACGAAGC TCGGGCCGGA AGAGATCACC CGCGACATCC CGAACGTCGG CGAGGAAGCC
CTGCGCAACC TCGACGAGGC CGGTATCGTC TATATCGGCG CCGAAGTGCA GCCGGGCGAC
ATCCTCGTGG GCAAGATCAC CCCCAAAGGC GAAAGCCCGA TGACGCCGGA AGAAAAGCTC
CTCCGCGCCA TCTTCGGCGA AAAGGCCTCG GACGTGCGCG ACACGTCGCT GCGCCTGCCG
CCGGGGGCCT ACGGCACGAT CGTGGAAGTG CGGGTCTTCA ACCGCCACGG CGTCGACAAG
GACGAGCGGG CGCTGCAGAT CGAGCGCGAG GAAGTCGAGC GTCTGGCCCG TGACCGGGAC
GACGAGCTCG CGATCCTCGA GCGCAACATC TACTCGCGTC TGCGTACGCT GATCATGGGC
AAGACCGCGG TGAAGGGGCC GAAGGGCATC CGGGCGGGCT CGGAGATCAA CGAGGACCTG
CTGTCCACGC TGTCGCGTGG CCAGTGGTGG CAGCTGGCGC TGGGTGAGGA AGCCGACGCG
AAGGAAGTCG AGGCCCTCCA CGAGCAGTTC GAGGCGCAGA AGCGCGCGCT CGATCACCGC
TTCGAGGACA AGGTCGAGAA GGTCCGTCGC GGCGACGATC TGCCTCCGGG CGTGATGAAG
ATGGTCAAGG TCTTCGTGGC TGTGAAGCGC AAGCTGCAGC CGGGCGACAA GATGGCCGGC
CGTCACGGCA ACAAGGGCGT CATCTCCAAG GTCGTGCCGA TCGAGGACAT GCCGTTCCTT
GCGGACGGCA CCCATGTCGA CCTTGTGCTC AACCCGCTCG GCGTGCCGTC GCGGATGAAC
GTGGGGCAGA TCCTCGAGAC CCACATGGGC TGGGCCGCAC GCGGTCTGGG CATCAAGATC
GACGAGGCGC TGCAGGACTA CCGCCGCTCG GGCGACCTCA CGCCGGTGAA GGAGGCCATG
CGTCTCGCCT ATGGCGACGA GACCTATGAA GGGGCCTTCG GCGACCGCGA GGACGAGGAT
CTGGTCGAAA TGGCCGGCCG CGTCACAAAG GGCGTGCCGA TCGCGACGCC GGTCTTCGAC
GGGGCGAAGG AGCCCGACGT CAACGACGCG CTGCGCCGGG CCGGCTTCGA CCAGAGCGGG
CAGTCCATCG TCTTCGACGG CCGCACGGGC GAGCAGTTCG CGCGTCCCGT CACCGTGGGC
GTGAAGTACA TGCTGAAGCT GCATCACCTC GTGGACGACA AGCTGCACGC GCGGTCGACC
GGTCCGTACT CGCTCGTCAC CCAGCAACCG CTGGGCGGCA AGGCGCAGTT CGGTGGCCAG
CGTCTGGGCG AGATGGAGGT CTGGGCTCTG GAAGCCTACG GCGCCGCCTA CACCCTGCAG
GAGATGCTGA CGGTGAAGTC GGACGACGTG GCGGGCCGCA CGAAGATGTA CGAGTCCATC
GTCAAGGGCG AAGACAACTT CGAGGCCGGC GTCCCGGAGT CGTTCAACGT GCTCGTCAAG
GAAGTGCGGG GCCTCGGCCT CAACATGGAA CTCCTGGATG CGGACGAGGA ATAA
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| Protein sequence | MAQSYVGQKR IRRYYGKIRE VLEMPNLIEV QKSSYDLFLK SGDGPKAADG EGIQGVFQSV
FPIKDFNETA VLEFVKYELE KPKYDVDECQ QRDMTYAAPL KVTLRLIVFD VDETTGARSV
KDIKEQDVYM GDMPLMTANG TFIVNGTERV IVSQMHRSPG VFFDHDKGKT HSSGKLLFAC
RIIPYRGSWL DFEFDAKDIV FARIDRRRKL PVTTLLYALG MDQEGIMDAY YETVNFKHQK
NRGWVTRFFP ERVRGTRPTY DLVDAATGEV ILKAGEKATP RMVKKWIDEA QITELLVPFD
HIVGRYVAQD IINEETGEIW VEAGDELTME YDRDGEVKGG TLKLLLDQGI TDIPVLDIDN
VNVGPYIRNT MAADKNMGRD TALMDIYRVM RPGEPPTVEA ASNLFDTLFF DSERYDLSAV
GRVKMNMRLD LGKPDTQRTL DRDDIIACIK ALTELRDGKG EIDDIDHLGN RRVRSVGELM
ENQYRVGLLR MERAIKERMS SVEIDTIMPQ DLINAKPAAA AVREFFGSSQ LSQFMDQTNP
LSEVTHKRRL SALGPGGLTR ERAGFEVRDV HPTHYGRMCP IETPEGQNIG LINSLATFAR
VNKYGFIETP YRKVVEGAVT DDVVYMSATE EMRHTVAQAN AQLDEEGRFV SDLISSRKAG
EFMLNPPDAI DLIDVSPKQL VSVAASLIPF LENDDANRAL MGSNMQRQAV PLLQSDAPFV
GTGIEAVVAR DSGAAIMARR AGVIDQVDAT RIVVRATEML EPGEPGVDIY RLRKFKRSNQ
SSCINQRPLV KVGDVVHRGE VVADGPCTDM GELALGRNVI VAFMPWNGYN YEDSILISER
ILRDDVYTSI HIEEYEVAAR DTKLGPEEIT RDIPNVGEEA LRNLDEAGIV YIGAEVQPGD
ILVGKITPKG ESPMTPEEKL LRAIFGEKAS DVRDTSLRLP PGAYGTIVEV RVFNRHGVDK
DERALQIERE EVERLARDRD DELAILERNI YSRLRTLIMG KTAVKGPKGI RAGSEINEDL
LSTLSRGQWW QLALGEEADA KEVEALHEQF EAQKRALDHR FEDKVEKVRR GDDLPPGVMK
MVKVFVAVKR KLQPGDKMAG RHGNKGVISK VVPIEDMPFL ADGTHVDLVL NPLGVPSRMN
VGQILETHMG WAARGLGIKI DEALQDYRRS GDLTPVKEAM RLAYGDETYE GAFGDREDED
LVEMAGRVTK GVPIATPVFD GAKEPDVNDA LRRAGFDQSG QSIVFDGRTG EQFARPVTVG
VKYMLKLHHL VDDKLHARST GPYSLVTQQP LGGKAQFGGQ RLGEMEVWAL EAYGAAYTLQ
EMLTVKSDDV AGRTKMYESI VKGEDNFEAG VPESFNVLVK EVRGLGLNME LLDADEE
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