| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0299 |
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| Symbol | ispH |
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| ID | 4897711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 316587 |
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| End bp | 317546 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640110881 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001042187 |
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| Protein GI | 126461073 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC CTCCCCTCAC CCTCTATCTG GCCGCCCCCC GGGGCTTCTG CGCGGGCGTG
GACCGCGCGA TCAAGATCGT CGAGATGGCG CTCGAGAAAT GGGGCGCTCC CGTCTATGTC
CGGCACGAGA TCGTGCACAA CAAGTTCGTC GTCGACAGGC TGCGCGACAT GGGCGCGGTC
TTCGTCGAGG AGCTGGACGA GGCGCCGACC GACCGGCCGG TAATTTTCTC GGCCCATGGC
GTCCCGAAGG CGATCCCCGC CGAGGCCGAG CGGCGGAACA TGGTCTATGT CGATGCCACC
TGCCCGCTGG TCAGCAAGGT CCATCTCGAG GCCGAACGGC ACCACGAGAA CGGGCTGCAG
ATGATCATGA TCGGTCACGC GGGCCATCCA GAGACCGTCG GCACCATGGG TCAGCTGCCC
GAGGGCGAGG TCCTGCTGGT CGAGACGGTG GAGGATGTGG CAGGGCTCGA AGTGCGGGAT
CCCGAGCGGC TGGCCTACAT CACCCAGACC ACGCTCTCGA TCGACGACAC TGCCGCCATC
GTGGCCGCGC TGCGCGAGCG TTTCCCGGCC ATCGCGATCC CGCGCAAGGA AGACATCTGC
TACGCCACGA CCAACCGGCA GGGCGCGGTC AAGGCCATCG CGGGCCGGAT CGACGCGCTA
CTGGTGATCG GGGCCCCGAA TTCCTCGAAC TCGAAGCGGC TCGTGGAAGT GGGTCGCGCC
GCCGGCTGCC GCGTGGCGCA GCTCGTGCAG CGCGCCACCG ATATCGACTG GGAGGCGCTG
CAGGGCGCCA CCTCCGTCGG CGTGGCCGCC GGAGCCTCGG CCCCGGAGGT GCTGGTGGAC
GAGGTGATCG CCGCCTTCCG CGCCCGGTTC GACACGACCG TCAAGGCCGT CGAGACCGTG
AAAGAGCGCG TCGAGTTCAA GGTGCCGCGC ATCCTGCGCG AGCCTGCCGA GACCCCGTGA
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| Protein sequence | MTMPPLTLYL AAPRGFCAGV DRAIKIVEMA LEKWGAPVYV RHEIVHNKFV VDRLRDMGAV
FVEELDEAPT DRPVIFSAHG VPKAIPAEAE RRNMVYVDAT CPLVSKVHLE AERHHENGLQ
MIMIGHAGHP ETVGTMGQLP EGEVLLVETV EDVAGLEVRD PERLAYITQT TLSIDDTAAI
VAALRERFPA IAIPRKEDIC YATTNRQGAV KAIAGRIDAL LVIGAPNSSN SKRLVEVGRA
AGCRVAQLVQ RATDIDWEAL QGATSVGVAA GASAPEVLVD EVIAAFRARF DTTVKAVETV
KERVEFKVPR ILREPAETP
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