| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0268 |
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| Symbol | |
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| ID | 4895228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 292500 |
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| End bp | 293594 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640110851 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001042159 |
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| Protein GI | 126461045 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.403367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC CCTCTGCCGC CCCCGGGCCG GCCTCTTCCG CCGTTCATGC CCCCGATGTC
CACGAGGAAG TCACCGAGGG CCTGCCGCCC GGCTTCGGCC CCGGCATCAT GGGCAAGGTG
GCCTTCTGGA TCGCCGTCGC CTTCTCGCTC TTCCAGCTCT GGACCGCGGG CTACGGCACC
CTGCCGAGCC AGGTCGTGCG GGCGATGCAT GTGGGCTTCC TGCTGCTTCT CGGCTTCGGC
CTCGTGGGCA ACCTCCTCGC CAGGACCGCG GTCACGCGGG CAATCTTCTG GGGGCTCGGG
CTGATCGGCT TCGGCACCGG GATCTACAAC TGGGTGCTCT ACGAGGAGCT GATCCGGCGC
ACGGGCTTTC TCACCCATGC CGATCTCGTG GTGGGCACCG TGCTCGTGGT GCTGGTGTTC
GAGGCCAGCC GCCGGCTGAT GGGATGGCCG CTCGCCATCA TCGCGGGCCT CTTCCTCGCC
TACTGCTTTC TCGGCCAGCA CATGCCGCCG CCCTTCATCC ACCGCGGCTA CGATTTCGAG
CAGATCGTCG AGCATTTCGC CTTCGGCACC GAGGGGATCT ACGGCACGCC GATCTATGTG
AGCTCGGCCT ATATCTTCAT CTTCGTGGTC TTCGCGGCCT TCCTCGAACG GGCGGGGATG
CTGAACCTCT TCAACGATTT CGCGCTCGGC CTCGTGGGCG GCGTGCGCGG CGGGCCTGCA
CAGGTGGCGG TGCTTTCCTC GGCGCTGATG GGGACCATCT CGGGCTCGGG CGTGGCCAAT
GTGGTAGCCT CGGGCCAGTT CACCATCCCG ATGATGAAAC GGTTCGGCTT CAAGCCCGCT
TTCGCGGGCG GGGTCGAGGC CACGGCCTCG ATGGGCGGGC AGATCATGCC GCCGGTGATG
GGGGCCGTGG CCTTCATCAT GGCCGAGACG CTGAACGTGC CCTATGCCGC CGTCGTGCAG
GCCGCGATCC TGCCGGCCGT GCTCTATTTC GGCGTGGTGT TCTGGATGGT CTGGCTTCAG
GCCGGGCGCG ACGGGCTGCG CGGCCTGCCG CGGTCGGAGC TGCCGAACCC GTGGCATGCG
GTGCGCGACC AGTGA
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| Protein sequence | MSAPSAAPGP ASSAVHAPDV HEEVTEGLPP GFGPGIMGKV AFWIAVAFSL FQLWTAGYGT
LPSQVVRAMH VGFLLLLGFG LVGNLLARTA VTRAIFWGLG LIGFGTGIYN WVLYEELIRR
TGFLTHADLV VGTVLVVLVF EASRRLMGWP LAIIAGLFLA YCFLGQHMPP PFIHRGYDFE
QIVEHFAFGT EGIYGTPIYV SSAYIFIFVV FAAFLERAGM LNLFNDFALG LVGGVRGGPA
QVAVLSSALM GTISGSGVAN VVASGQFTIP MMKRFGFKPA FAGGVEATAS MGGQIMPPVM
GAVAFIMAET LNVPYAAVVQ AAILPAVLYF GVVFWMVWLQ AGRDGLRGLP RSELPNPWHA
VRDQ
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