Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0265 |
Symbol | |
ID | 4896774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 288123 |
End bp | 289916 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640110848 |
Product | histidine kinase |
Protein accession | YP_001042156 |
Protein GI | 126461042 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.937441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCTCATC CCGCATCCCA TCCCGTCCGT CGCAGCCCCG GCAGCCGTCT GGCCGGGATC CTGCTGCTTG CCGCCACGCT CGCCCTGTCG CTCGCGACCT ATCAGGGGGT GCGCTACGCG AGCCTCGCGG GGCTCGACAC CGAGCTTCAG GATCGGCTGA CCGTCGCGCG CCATGCCGTC GTCTCCGAGA TCGAGCGGTT CCGCTATCTG CCGGGCCTCG TCGGGCAGGA TGCGCGGGTG ACGGGGCTTC TGGAGGGGCA GGCTTCGGCG GAGGCTGCCA ACGGCTATCT GCGCCGCGTG CGGGATCTGT CGGGGGTGGA CGAGATCTAT GTGATCGACC CGTCCGGCAC CACGCGCGCG GCGAGCAACT GGAACGAGCC CGGCAGCTTT CTGGGCCAGA ACTATGGGTT TCGCCCCTAT TTCCGTCGCG CGCTGGCCGA GGGCGAGGCG CGCTATTACG CGGTGGGCGT GACGACCGGC AAGCCCGGCT ACTTCCTCGC CTCGCGGCTC GGGCCTGCCG ACCGGCCGCT GGGGGTCGCC GTGGCGAAGG TGGATCTGGC CGGGCTGCAA TCGACCTGGG TCCGCGCGGG CGAGGCGGTG GCGCTGGCCG ATCCTCTGGG CGTGGTCTTT CTGGCCGGGC CGCAGGGCTG GCTCTACCGG CCGCTCGCGC CGCTCGATCC GCAGAGCCGC GCGCTTCTGC GCGCCGAGCG CCGCTATGCC GGACTTGCCG TGGACGAGGC GCAGCCGCTC GGGCCGGAGA TGGCGACCGA TGCGGGGCTT GCCCTGCGGG TGGCCGATGC GGCCATCGCG CCCGACGACT GGCGTCTGCT GGTGGGGCTG CCGACGGCCC CCGCCCTCGC CACGGCGCGG CTCTCGGCGC TGATCGTGGC GCTGGCGGGG CTTCTCGCCT CGGCGGGCCT TCTGGCCCTG CACGAGCGGC GCCAGCTTCT GCGCGAGCGG CTGAACCAGC ACGCGCTCCT CGAACGGGCG GTGGCCGAGC GCACCGAGGC CCTGGCTCAC GAGATCGAGG AGCGGCGGCG GGCCGAGCAC GAGCTGCGCG AGACCCACGA GCATCTCGTC CATGCGGCTA AGCTCGCGGT GCTGGGGCGG ATGTCCTCGA CCATCGTGCA TGAGGTGAGC CAGCCGCTCT CGGCGCTCGA GGCAACGCTC GCCGCGGCCG AGCTGCATCT GGGCCGTGAA AACCCGGAGC GGGCGCTGCG CTCGGTCCGC TCGGGGCGCG ACCTGCTTCT GCGGATGCAG AAGATGGTGA AGGCGCTGAA GAGCTTCGGC TCGCGTCAGC GGCTCGATCC GCCCGAGCCC GTCGACATGG GCACGGTGCT GGCGGCCGCG GCCGAGGTAC TGGCGCCGCG GCTGCGCGAA CTCGGCGTGG CGCTGGACCT GCCGCCCGCC GAGGTGCTGC CGCCGGTGCG CGGGCACGCC GTCCGGCTCG AGCAGGTGGC GACCAACCTC ATCCTCAACG CGGCCGAGGC CACGGCCTCG GGCGGCGGCA GGGATCCGGT CGAGGTGCGG CTCGAACCTC TTGCGGAGGG GCTGCGGCTG ACCATCGCCG ACCGCGGGCC GGGCATCCCC GAGGCACTGC GCGAGAAGAT CCTCGAGCCC TTCTTCAGCA CGCGGACCAC AGGGCTCGGG CTCGGCCTTT CCATCGTGCG CACCATGCTC GAGCAGATGG CGGGGTCTCT GAGCTTTGCC GAGCGGCCGG GCGGCGGAAC GCTGACGCAG GTCGATCTCG CGCTTTACGA GCCGGGCCGC GAGGCGCTAC GCAGACGCGC ATGA
|
Protein sequence | MAHPASHPVR RSPGSRLAGI LLLAATLALS LATYQGVRYA SLAGLDTELQ DRLTVARHAV VSEIERFRYL PGLVGQDARV TGLLEGQASA EAANGYLRRV RDLSGVDEIY VIDPSGTTRA ASNWNEPGSF LGQNYGFRPY FRRALAEGEA RYYAVGVTTG KPGYFLASRL GPADRPLGVA VAKVDLAGLQ STWVRAGEAV ALADPLGVVF LAGPQGWLYR PLAPLDPQSR ALLRAERRYA GLAVDEAQPL GPEMATDAGL ALRVADAAIA PDDWRLLVGL PTAPALATAR LSALIVALAG LLASAGLLAL HERRQLLRER LNQHALLERA VAERTEALAH EIEERRRAEH ELRETHEHLV HAAKLAVLGR MSSTIVHEVS QPLSALEATL AAAELHLGRE NPERALRSVR SGRDLLLRMQ KMVKALKSFG SRQRLDPPEP VDMGTVLAAA AEVLAPRLRE LGVALDLPPA EVLPPVRGHA VRLEQVATNL ILNAAEATAS GGGRDPVEVR LEPLAEGLRL TIADRGPGIP EALREKILEP FFSTRTTGLG LGLSIVRTML EQMAGSLSFA ERPGGGTLTQ VDLALYEPGR EALRRRA
|
| |