| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0259 |
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| Symbol | |
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| ID | 4898041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 281616 |
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| End bp | 282590 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640110842 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001042150 |
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| Protein GI | 126461036 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA AATCCCTTGC CCTCGCCGCG CTGCTCGGCG CCGCCGCCGT CCTGCCGGCC
GCCGCTCAGG AAGTGGTGGT GCGCGTCGCC TACGAGAACA ACCCGGGCGA ACCCACCGAC
CTCGTGATGA ACCGCTGGGC CGAACTCGTG AAGGAAGCCT CGGACGGCAA CGTGGCCCTC
GAGCTCTATC CCTCGTCGCA GCTCGGCGCG AAGCAGGATG TGATCGAGCA GGGCCTGCTC
GGCGTCAACG TCATCACCAT CGCCGACGTG GGCTTCCTGA CCGACTACGA CCCCGACCTC
GGCATCCTCT TCGCCCCCTA CCTGACCGAC AGCCCCGAGC AGCTCTTCAA GATCTACGAG
AGCGACTGGT TCAAGGAGAA GGAAGCCGCG CTGCGCGAGA AGGGCGTGCA TATCGTCATC
TCGAACTACC TCTACGGCAC CCGTCAGCTT CTGGCCAAGA AGAAGGTCGA GAAGCCCGAG
GATCTGGCCG GCATGAAGAT CCGCGTGCCC AACAACATCA TGCAGATCAA GGCGTTCGAG
CTGATGGGCG CCACGCCCAC CCCGATGCCG CTGGGGGATG TCTACCCGGC GCTGACCCAG
GGCGTGATCG ACGGTGTCGA GAACCCGCTG CCCGTCCTCT ACGGCGGCAA GTTCCACGAG
CAGGCCAAGG AGCTGTCGAT GATCAGCTAC CTGACCAACA CCTCGCTCTG GCTCGGCGGC
GAGGCCTATT TCTCGACCCT CGATCCCGAA GTGGTGACCA TGCTGCACGA GACCGGCTAT
CAGGCGGGCC TCTACAGCCA GGAGCTCGCG GCGCAGGAAG AGGCCAAGAT GCTCGAGGCC
ATGAAGGAAG CGAGCGTCAC CGTGACCGAG CCCGACGTCG AGGCCTTCCG CGAGAAGACC
AAGGCCTTCT ACACCATGTT CCCGGAGTGG TCCGAGGGAC TCTACGAGCA GATCCAGGCG
GCTCTCGCCG AGTGA
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| Protein sequence | MKLKSLALAA LLGAAAVLPA AAQEVVVRVA YENNPGEPTD LVMNRWAELV KEASDGNVAL
ELYPSSQLGA KQDVIEQGLL GVNVITIADV GFLTDYDPDL GILFAPYLTD SPEQLFKIYE
SDWFKEKEAA LREKGVHIVI SNYLYGTRQL LAKKKVEKPE DLAGMKIRVP NNIMQIKAFE
LMGATPTPMP LGDVYPALTQ GVIDGVENPL PVLYGGKFHE QAKELSMISY LTNTSLWLGG
EAYFSTLDPE VVTMLHETGY QAGLYSQELA AQEEAKMLEA MKEASVTVTE PDVEAFREKT
KAFYTMFPEW SEGLYEQIQA ALAE
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