| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0257 |
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| Symbol | |
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| ID | 4898038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 279765 |
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| End bp | 281036 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640110840 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001042148 |
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| Protein GI | 126461034 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGT TCATCGTCAT CGCGCTGATG TTCGCGCTCT TTGCGCTGAA CATGCGCATC
TATCTCGCCA TGTTCGCGGC AGTGGTTGCC TATTTCGTCT TCTTCTCGAC GGTGCCGCTG
CCCATCGCCG TGCAGCGCAT TATCTCGCCC ACGCAGAACA CCTCTCTGCT GGCCATCCCC
TTCTTCGTGC TGCTGGGCAC GCTGCTCGGC ACCACGGGGA TCGCCGGGCG CCTGCTGAAG
CTCGCCGACC TGATGGTCGG GCGGCTCACC GGCGGGCTCG GGCATACCAA TGTCATGCTG
TCCACGCTGA TGGGCGGGAT CTCGGCCTCG AACCTCGCCG ATGCCGCGAT GATGTGCCGG
ATCCTCGTGC CCGAGATGCG CCGTCAGGGC TACAGTGCCG GGGCCGCCGC CGCCATCACC
GCCTGCGGCT CGCTCATCAC GCCGATCATC CCGCCGGGGA TCGCGCTCAT CATCTATGCG
CTGGTGGCCG ACGTCTCCAT CGGCGCGATG TTCACCGCGG GCATCCTGCC CGGCCTCATG
TGCGCGGCCC TGCTGATCTT CGCCGTCTGG CTCAATGCCC GCAGCCGGGG CCTCAAGCCC
TCGCGCGACA GCTGGCCCAC CGCGCAGGAG ACGCGCCAGA CGATCATCGG CGCCTGGCCT
GCGCTCTTTC TCGTGCTGGT GATCGTGGGC GGCATCCGCC TGTCGATCTT CACCCCCACG
GAAGCGGGCG CCGTGGCCAC CATCGTGACC CTCGCCATCG GCCTGTTCCT CTACCGCGAG
ATGAAGCTCG CCGACGTCGG CGCGGCCTTC GCCGAGACGG CGCGGCAGAC GTCGGCGGTG
CTCCTCGTCA TCATGACCTC CTCGGCCCTC GCCTGGATCT TCTCGATGGA GCGCGCGGGC
ATCACGATGG CCGAGCTCAT CACCAACCTG ACCACCAACC CCTGGCTCTT CCTGCTGGCG
GTGAACCTGA TGCTCCTCGT GCTCGGCATG TTCATCGAGG GCACGGCGCT GATGATCATC
CTCGTGCCGC TCCTGAAGCC CGTGGTCCAG CAGCTCGGCA TCGACCCGGT GCATTTCGGG
ATCGTGCTGA TCCTGAACCT TTCGATCGGC ACGCTGACAC CGCCGGTGGG AACGGTTCTC
CTTCTGGTCA CGAACCTCAC AGGCGCGAAG CTCGCGGAGT TTCTGCGCGA CGGCTGGCCG
TTCCTGCTCG CGCTTGTGGT GGCGCTCCTC CTTGTGACCT TCGTGCCGGC CATCTCGCTG
GCGCTGGTCT GA
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| Protein sequence | MTWFIVIALM FALFALNMRI YLAMFAAVVA YFVFFSTVPL PIAVQRIISP TQNTSLLAIP
FFVLLGTLLG TTGIAGRLLK LADLMVGRLT GGLGHTNVML STLMGGISAS NLADAAMMCR
ILVPEMRRQG YSAGAAAAIT ACGSLITPII PPGIALIIYA LVADVSIGAM FTAGILPGLM
CAALLIFAVW LNARSRGLKP SRDSWPTAQE TRQTIIGAWP ALFLVLVIVG GIRLSIFTPT
EAGAVATIVT LAIGLFLYRE MKLADVGAAF AETARQTSAV LLVIMTSSAL AWIFSMERAG
ITMAELITNL TTNPWLFLLA VNLMLLVLGM FIEGTALMII LVPLLKPVVQ QLGIDPVHFG
IVLILNLSIG TLTPPVGTVL LLVTNLTGAK LAEFLRDGWP FLLALVVALL LVTFVPAISL
ALV
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