| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0248 |
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| Symbol | deoA |
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| ID | 4897868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 269909 |
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| End bp | 271216 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640110831 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001042139 |
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| Protein GI | 126461025 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.363539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGCGC GATCGATCAA CGCAAAGCTG CGCCGGGGCG AAGTGCCCTC GGCCGCTGAA
CTGGGCTGGT TCGCGGAAGG TCTGGCCTCG GGCCATGTCA CCGATGCGCA GGCCGGCGCC
TTCGCCATGG CGGTCTGCCT GCAGGGGCTG GGCGAGGAGG GGCGTGTGGC CCTGACGCGC
GCCATGCGCG ACTCCGGCCG TGTGCTCGCC TGGGATCTGC CGGGGCCGGT GCTCGACAAA
CATTCGACGG GCGGCATCGG CGACTGCACC TCGCTGCTCC TCGCGCCGGC TCTGGCTGCC
TGCGGGGCCT ATGTGCCGAT GATCTCGGGT CGGGGCCTCG GCCATACGGG GGGCACGCTC
GACAAGCTGG AAGCGATCCC GGGCTTCCGC GTGGCCCTGG GCGAAGAGCG GCTGCGCGCG
CAGATCGAGG ATGTCCGCTG CGCCATCGTC GCCGCCGACG AGGGCATGGC GCCCGCGGAC
CGGCGGCTCT ACCTCATCCG CGACGTGACC GGCACGGTCG AATCGATCGA CCTCATCACC
GCGTCGATCC TGTCGAAGAA GCTGGCGGCC GGCCTCGAGG GGCTGGTGCT CGATGTGAAA
GTGGGCTCGG GCGCCTTCAT GAAGTCGATG GACGAGGCCG AAGCGCTGGC GCGTGCTCTG
GTGGGCACGG CGCAGGGGGC GGGCTGCATG ACATCGGCCC TCATCACCGA CATGAGCCAG
CCGCTCGCGA CCGCGGCCGG CAATGCGCTC GAGGTGATCG AGGTGATGGA GACGCTGACC
GGCACCTCGA TCAACGCGGC ACTCTGGGAC GTGACGGTGG CGCTCGGCGG TGAGGCTCTG
GCGCTGGGCG GGCTTGCCGC CGACGCCGAG GACGGGGCGC ACCGGATCGA GCAGGCGCTG
GAAAGCGGGC ACGCGGCCGA GTTCTTCGCC CGCATGGTGG CGGCGCAGGG CGGGCCGGTC
GATTTCGTCG AACGCTGGCC CGACCGGCTG CCCTCGGCCC CGGTGATGCG CGAGGTGCCG
AGCCTGCGCA CGGGCTTCGT GCTGCGCATC GACACGGCGG CGCTCGGTCA GGCGGTGGTG
CATCTGGGCG GCGGGCGGCT GCGCGAGACC GACCGGGTGA ATCCCTCGGT GGGTCTGGCT
GATATCGCCG GGATCGGCGA AGAAGTGTCC GAGGATCTGC CGCTCGCCAT GATCCATGCC
GCGACCGAGG CCGATGCCGA TGCTGCGGTG GCCGCGATTC AGGCGGCCTA TGTGATCTCG
GATCAGGAGC CGGCCGAACC GCCGCTCATC CATGCGAGGA TCGCCTGA
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| Protein sequence | MDARSINAKL RRGEVPSAAE LGWFAEGLAS GHVTDAQAGA FAMAVCLQGL GEEGRVALTR
AMRDSGRVLA WDLPGPVLDK HSTGGIGDCT SLLLAPALAA CGAYVPMISG RGLGHTGGTL
DKLEAIPGFR VALGEERLRA QIEDVRCAIV AADEGMAPAD RRLYLIRDVT GTVESIDLIT
ASILSKKLAA GLEGLVLDVK VGSGAFMKSM DEAEALARAL VGTAQGAGCM TSALITDMSQ
PLATAAGNAL EVIEVMETLT GTSINAALWD VTVALGGEAL ALGGLAADAE DGAHRIEQAL
ESGHAAEFFA RMVAAQGGPV DFVERWPDRL PSAPVMREVP SLRTGFVLRI DTAALGQAVV
HLGGGRLRET DRVNPSVGLA DIAGIGEEVS EDLPLAMIHA ATEADADAAV AAIQAAYVIS
DQEPAEPPLI HARIA
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