| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0193 |
|---|
| Symbol | |
|---|
| ID | 4896846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 213402 |
|---|
| End bp | 214082 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640110776 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001042084 |
|---|
| Protein GI | 126460970 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.334053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.472012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGTGA AGGATCCTTC GGACAAGCTG CTCTCGCTCG AGGGCGTGAC CAAAAGCTAC
GCGACCGGCG AGGGGCCGGT GCAGGTTCTG GCCGGGGTGG ACCTGACGCT CGCCGCGGGC
GAGAGCCTCG CGCTGACGGG AGAGTCGGGC AGCGGCAAGA GCACGCTCCT GCATCTGGCG
GCCGGGCTCG ATGCGGCGGA CGCGGGCCGG ATCGTCGTGG CGGGCCATGA TATCTCGCAG
GCCGGCGATG CCGATCGCGC GCGTCTGCGG CGAGGCACGG TCGGGCTCGT CTTCCAGCAG
TTCAACCTGA TCCCCTCGCT CGACGTGGCG GCCAATCTTG CCTTTCAGGC CCGCCTCGCC
GGGCGGCACG ATCCCCAATG GCAGGCCGAG CTGGCCGAGA CGCTGGGGCT TGCCGCCTGT
CTGCACCGCT ATCCCGAGCA GCTCTCGGGC GGCCAGCAGC AGCGGGTGGC CATCGGCCGG
ACGCTCGCCG CCCGCCCCCG CCTCGTGCTG GCCGACGAGC CCACCGGCAA CCTCGACGAG
GCCACGGGCG ATGCCGTCAT CGCGCTCTTC CTGCGCCTCG TGAGCCAGAC CGGCGCCGGG
CTTCTGATGG TCACCCATTC GGCCCGCCTC GCGGGGCGGC TTCAGGGCCG GGTGCAGCTC
TCGGCGGGGC GGGTCGCATG A
|
|---|
| Protein sequence | MRVKDPSDKL LSLEGVTKSY ATGEGPVQVL AGVDLTLAAG ESLALTGESG SGKSTLLHLA
AGLDAADAGR IVVAGHDISQ AGDADRARLR RGTVGLVFQQ FNLIPSLDVA ANLAFQARLA
GRHDPQWQAE LAETLGLAAC LHRYPEQLSG GQQQRVAIGR TLAARPRLVL ADEPTGNLDE
ATGDAVIALF LRLVSQTGAG LLMVTHSARL AGRLQGRVQL SAGRVA
|
|---|
| |