Gene Rsph17029_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0177 
Symbol 
ID4898049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp191627 
End bp194620 
Gene Length2994 bp 
Protein Length997 aa 
Translation table11 
GC content75% 
IMG OID640110760 
Productputative helicase/exonuclease 
Protein accessionYP_001042068 
Protein GI126460954 
COG category[L] Replication, recombination and repair 
COG ID[COG3893] Inactivated superfamily I helicase 
TIGRFAM ID[TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.169187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACA CTCCGGGCCC CCGCCTCTTC GGCCTGCCGC CGGGCGTGGA CTTTCCCGCG 
GCACTGGTGC GTGGCCTGCG CGCGCGCATG GCAGGGGCCG CGCCCGAGGC CATGGCGCGG
GTCGAGCTTT ACGTCAACAC GCAGCGGATG CGGCGGCGGA TCACCGAGCT GATGACGGCC
GAGGGCACGG GGTTCCTGCC GCGCATCCGC CTCGTGACCG AGCTGCCGCC GGTGCCGGGC
CTGCCCGCCC CGGTCCCGCC GCTGCGCCGC AGGCTCGAGC TTGCGCAGCT CGTGGCCCGG
CTGATCGAGG CCCAGCCCGA CATCGCGCCG CGCTCGGCGC TCTTCGATCT GTCGGACAGC
CTCGCCGAGC TTATCGACGA GATGCAGGGC GAGGGCGTGC CGCCCGAGGC CATCGCGCGG
CTCGATGTGG CCGACCATTC GGCGCACTGG CAGCGGACGC AGGCCTTCAT GGCGATCGTG
GCGCCGATGT TCGGCGCGGA CGCGCCCGAT GCGCAGGCGC TGGCGCGGAT GGCGGTCGAA
CGGATCGCGG CGCGCTGGGC CGAGGCGCCG CCCGATCATC CGGTGATCGT CGCGGGCTCG
ACCGGTTCGC GCGGCACGAC CAGCCTCTTC ATGCAGGCGG TGGCGCGGCT GCCGCAGGGC
GCGCTCGTGC TGCCCGGCTT CGACTTCGAC CTGCCCGCCG CGGTCTGGGA GGGGATGGAC
GACGCGCTGA CCGCCGAGGA TCATCCGCAG TTCCGCTTTC ACCGGCTGAT GGGCCTCGTG
GGCGCAGGCC CCGCCGAGGT CGGCCGCTGG ACCGACGAGA TCCCGCCCAG CCCGGACCGA
AACCGGCTGA TCTCGCTGTC GTTGCGGCCC GCGCCCGTCA CCGACCAGTG GCTGACCGAG
GGCCGGCACC TCACCGGACT TGCCGAGGCC GCGCGCGGCA TGACGCTCAT CGAGGCGCCG
GGGCCGCGGG CCGAGGCGCT GGCGGTGGCG ATGATCCTGA GGAAGGCCGC CGAGGAGGGA
CGCCGCGCGG CGCTCATCAC CTCGGACCGG GGGCTCACGC GGCAGGTGGC GGCGGCGCTC
GACCGCTGGG GGATCGTGCC GGACGATTCC GCGGGCAAGC CGCTCGCGCT CTCGGCGCCG
GGGCGCTTCC TGCGCCATGT GGCCCGGCTC TTCGGCCGGC GGCTGACCGG GGAGACGCTG
CTCACGCTGC TGAAACATCC GCTGACGGCG ACCGGCGCGG ACCGCGGCAA CCACCTGCGC
TGGACGCGGG ATCTGGAGCT GCACCTGCGG CGGAAGGGGC CGCCCTTCCC GGCGGCGGCC
GATCTGGCGC TCTGGGCCGG AACACGGCCT GCGGACGGGG TGGCGGACTG GGCGCGCTGG
CTGGGCGGAC TGATCGAGGG GCTGGACGCG GCAGGCCCGC GCCCGCTCGC CGATCATGTG
GCCGCGCATC TCGCGCTGGC CGAGGCGCTG GCCACGGGGC CCGCGGGCGA CACCACAGGC
GAGCTCTGGC TGAAGGAGGC CGGCGAGGCC GCGCGCGCCG CCGTCGAGGA GCTCCGCCGC
GAGGCGCCGC ACGGGGGCGA GCTGACGCCG GCCGATTACA CCGACCTCTT CGACGCGATC
CTCGCGCGTG GCGAGGTGCG CGAGGCGGTG CAGGCCCGGC CCGATCTGAT GATCTGGGGC
ACGCTCGAGG CGCGCGTGCA GGGGGCGGAT CTCGTGATCC TGGGCGGGCT GAACGACGGG
ACATGGCCGC AGCTGCCGCC GCCCGACCCG TGGCTCAACC GGCAGATGCG GCTGAAGGCC
GGGCTTCTCC TGCCTGAGCG GCGGATCGGC CTGTCGGCGC ACGATTACAG TCAGGCGGTG
GCCGCGCCCG AGGTGGTGCT GACCCGCGCC ACCCGAGATG CCGAGGCCGA GACGGTGCCC
TCGCGCTGGC TGAACCGCCT GATGAACCTG ATGAGCGGGC TGAAGGCGGG CGGAGGGCCC
GAGGCTCTGG CCGGGATGCG CGCGCGCGGC CGCGACTGGC TGGACCTCGC CGCGGCGCTG
GAGCAACCCG CGACGCCGGT GCCGCTCGCC ACGCGGCCCG CGCCGCAGCC CCCCGTCCCG
GCCCGACCCG AGCGGCTGGC CGTGACGGGC ATCCGCACGC TGATCCGGGA TCCCTATGCT
GTCTATGCCC GCCACATCCT GCGGCTCTAT CCGCTCGACC CGCTGCACCG GGCGCCGGAT
GCGCGGCTGC GCGGCTCGAT CCTGCACCGC ATCCTCGAGG CCTTCGTGAA GGACCGCGCG
CCGGGGGGCG ACCGCCCCGC CGAGCGCGCG CGCCTGATGC GGATCGCGGA GGCGGTGCTG
GCCGAGGAGG TGCCCTGGCC CGCGGCCCGG GCGCTCTGGC TCGCGCGGCT CGACCGGGCC
GCCGACTTCT TCCTCGAGAC CGAGGCCGCC CATGCCGGCA CCCCGGTCGT GCTGGAGGAG
GAGGGGCGCG TGGATCTGAC CCCCCTGCGC TTTACGCTGA CGGCCAAGCC CGACCGGATC
GACGTCCTGC CGGACGGGCG GCTCCATATC CTCGACTACA AGACCGGCAC GCCGCCTACG
AAGAAGCAGC AGGAGCAGTT CGACAAGCAG CTCCTCCTCG AGGCGGCGAT GGCCGAACGC
GGCGGCTTCC GCGGCCTCGG ACCCGCCGAG GTGGCGCGGA TCAGCTACAT CGGCCTCGGC
ACCAGCCCCA AGGTCGAGAG TGTCGAGACC GATGCGGCGC TCCTCGGGCA GGTCTGGGAG
GGGCTTCACG CCCTCATCGG CCGCTACATG CGGCGTGAGC AGGGCTATGT CTCGCGCCGC
GCCATGTTCG GCGAACGCTT CCCGGGCGAT TACGACCATC TCGCGCGGTT CGGCGAGTGG
GAGATGAGCG ACGCGCCCGT GCCCGCGCCG GTGGGGGCCG AGGCGCCGGG TGCAGGCTCC
GCGGAGGCGG GGACGGATCG CGACAGGGGA AGCTGCCCGG AGGATGCCGC GTGA
 
Protein sequence
MFDTPGPRLF GLPPGVDFPA ALVRGLRARM AGAAPEAMAR VELYVNTQRM RRRITELMTA 
EGTGFLPRIR LVTELPPVPG LPAPVPPLRR RLELAQLVAR LIEAQPDIAP RSALFDLSDS
LAELIDEMQG EGVPPEAIAR LDVADHSAHW QRTQAFMAIV APMFGADAPD AQALARMAVE
RIAARWAEAP PDHPVIVAGS TGSRGTTSLF MQAVARLPQG ALVLPGFDFD LPAAVWEGMD
DALTAEDHPQ FRFHRLMGLV GAGPAEVGRW TDEIPPSPDR NRLISLSLRP APVTDQWLTE
GRHLTGLAEA ARGMTLIEAP GPRAEALAVA MILRKAAEEG RRAALITSDR GLTRQVAAAL
DRWGIVPDDS AGKPLALSAP GRFLRHVARL FGRRLTGETL LTLLKHPLTA TGADRGNHLR
WTRDLELHLR RKGPPFPAAA DLALWAGTRP ADGVADWARW LGGLIEGLDA AGPRPLADHV
AAHLALAEAL ATGPAGDTTG ELWLKEAGEA ARAAVEELRR EAPHGGELTP ADYTDLFDAI
LARGEVREAV QARPDLMIWG TLEARVQGAD LVILGGLNDG TWPQLPPPDP WLNRQMRLKA
GLLLPERRIG LSAHDYSQAV AAPEVVLTRA TRDAEAETVP SRWLNRLMNL MSGLKAGGGP
EALAGMRARG RDWLDLAAAL EQPATPVPLA TRPAPQPPVP ARPERLAVTG IRTLIRDPYA
VYARHILRLY PLDPLHRAPD ARLRGSILHR ILEAFVKDRA PGGDRPAERA RLMRIAEAVL
AEEVPWPAAR ALWLARLDRA ADFFLETEAA HAGTPVVLEE EGRVDLTPLR FTLTAKPDRI
DVLPDGRLHI LDYKTGTPPT KKQQEQFDKQ LLLEAAMAER GGFRGLGPAE VARISYIGLG
TSPKVESVET DAALLGQVWE GLHALIGRYM RREQGYVSRR AMFGERFPGD YDHLARFGEW
EMSDAPVPAP VGAEAPGAGS AEAGTDRDRG SCPEDAA