| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0146 |
|---|
| Symbol | |
|---|
| ID | 4896354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 163871 |
|---|
| End bp | 164509 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640110729 |
|---|
| Product | outer membrane lipoprotein carrier protein LolA |
|---|
| Protein accession | YP_001042038 |
|---|
| Protein GI | 126460924 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.193487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGTC CCCGGGGAGC CCCTAGCTTC ATCACCATGA AACCGATGCG TCTGATCCTC
GCGCCTCTGG CGTTCCTCGC CCTCGCGCTG CCTGCGGCAG CCGAGAAGAT CCCGCTCTCC
GCGCTCTCGT CCTATCTCAA CGGGCTGAGC ACGGCCGAGG CCGATTTCAC TCAGGTGAAT
GCGGACGGCT CGGTCTCGAC CGGGCGCATC TTCATCAAGC GGCCCGGCCG CGTGCGCTTC
GAATATGCGC CGCCGGAGAA GAGCCTCGTG GTGGCCGGCG GCGGGCAGGT GGCGATCTTC
GACGCCAAGT CGAACCAGCC GCCCGAGCAA TATCCGCTGA GCCGCACGCC GCTGAGCCTG
ATCCTCGCCC AGAACATCGA CCTCGGGCGG GCGAAGATGG TGGTGGGGCA CCGCGAGGAC
AAGAACACCA CCCGCGTCGT GGCGCAGGAT CCGGCGCACC CGGAATATGG CACGATCGAG
ATGGTCTTCA CCGCGAATCC GGTGGCGCTG CGCCAGTGGG TCATCACCGA CGATGCGGGC
AATCAGACGA CGGTGATCCT CGGCGCCATG GCGCAGGGCC GCAATCTTCC GGCCTCGCTC
TTCAGCATCC AGTCCGAAGC GGCCAAGCGC AGCCGCTGA
|
|---|
| Protein sequence | MRSPRGAPSF ITMKPMRLIL APLAFLALAL PAAAEKIPLS ALSSYLNGLS TAEADFTQVN
ADGSVSTGRI FIKRPGRVRF EYAPPEKSLV VAGGGQVAIF DAKSNQPPEQ YPLSRTPLSL
ILAQNIDLGR AKMVVGHRED KNTTRVVAQD PAHPEYGTIE MVFTANPVAL RQWVITDDAG
NQTTVILGAM AQGRNLPASL FSIQSEAAKR SR
|
|---|
| |