Gene Rsph17029_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0131 
Symbol 
ID4895236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp146405 
End bp147328 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID640110714 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001042023 
Protein GI126460909 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.591349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.87569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCT ACACGCTGCG ACGGCTCGCC TCGGCCGTCC CGACCGTCTT CATCATCGTC 
ACCCTCACCT TCTTCATGAT CCGGCTTGCG CCCGGCGGCC CGTTCGACCT CGAACGGCCG
CTCGATCCGC TCATCATGGA GAACCTCAAG CGGGCCTATA ACCTCGACGG CTCGCTCTGG
TCGCAATATC TGACCTACAT GGGCAACCTC ATGCAGGGCG ACCTCGGCCC TTCGTTCACG
AAGCGCGATT TCACCGTGAA CGACCTCTTC GCCTCCGGCC TGCCGATCTC GATGCTGCTG
GGCGGCCTTG CCATCTCGCT CGCGGTGGCG ATCGGCACGA TCCTCGGCGC CATCGCGGCG
CTGAGGCAGA ATTCCTGGCT CGACTATACG ATCGTGGGGC TCGCGACTTT CGGCATCACG
ACGCCGAACT TCGTGGTGGC CCCGCTGCTG AGCCTCTTCT TCGGGGTGAT CCTGCGCTGG
CTGCCGGCGG GCGGCTGGTC CTCCTCCGAT CCCGCCTACT GGGTGCTGCC GGTGGTGACG
CTCGCCCTGC CGCAGGTGGC GGTGATCGCG CGCCTCGTGC GCGGCGCGAC CATCGAGGCG
CTGCGCTCGA ACCATGTCCG CACCGCCCGC GCCTATGGCC TGCCCGCCCG GACGGTGGTG
GTGAAGCACG CGCTGCGCGC GGCCATGCTG CCGGCGGTGA GCTACCTCGG CCCCACGGCC
GCGGGTCTCC TGACCGGCTC GGTCGTGGTC GAGACGATCT TCGGCCTGCC CGGCATCGGA
CGCTACTTCG TGCAGGGCGC GCTCGGACGC GACTACACGC TCGTGATGGG GACCGTGGTG
GTCATTGCCC TCTTCATCCT GCTCTTCAAC CTGATCGTGG ACCTGCTCTA CACGCTCCTC
GACCCGCGGG TGCGCTATGA CTGA
 
Protein sequence
MLRYTLRRLA SAVPTVFIIV TLTFFMIRLA PGGPFDLERP LDPLIMENLK RAYNLDGSLW 
SQYLTYMGNL MQGDLGPSFT KRDFTVNDLF ASGLPISMLL GGLAISLAVA IGTILGAIAA
LRQNSWLDYT IVGLATFGIT TPNFVVAPLL SLFFGVILRW LPAGGWSSSD PAYWVLPVVT
LALPQVAVIA RLVRGATIEA LRSNHVRTAR AYGLPARTVV VKHALRAAML PAVSYLGPTA
AGLLTGSVVV ETIFGLPGIG RYFVQGALGR DYTLVMGTVV VIALFILLFN LIVDLLYTLL
DPRVRYD