Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0131 |
Symbol | |
ID | 4895236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 146405 |
End bp | 147328 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640110714 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001042023 |
Protein GI | 126460909 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.591349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.87569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGCT ACACGCTGCG ACGGCTCGCC TCGGCCGTCC CGACCGTCTT CATCATCGTC ACCCTCACCT TCTTCATGAT CCGGCTTGCG CCCGGCGGCC CGTTCGACCT CGAACGGCCG CTCGATCCGC TCATCATGGA GAACCTCAAG CGGGCCTATA ACCTCGACGG CTCGCTCTGG TCGCAATATC TGACCTACAT GGGCAACCTC ATGCAGGGCG ACCTCGGCCC TTCGTTCACG AAGCGCGATT TCACCGTGAA CGACCTCTTC GCCTCCGGCC TGCCGATCTC GATGCTGCTG GGCGGCCTTG CCATCTCGCT CGCGGTGGCG ATCGGCACGA TCCTCGGCGC CATCGCGGCG CTGAGGCAGA ATTCCTGGCT CGACTATACG ATCGTGGGGC TCGCGACTTT CGGCATCACG ACGCCGAACT TCGTGGTGGC CCCGCTGCTG AGCCTCTTCT TCGGGGTGAT CCTGCGCTGG CTGCCGGCGG GCGGCTGGTC CTCCTCCGAT CCCGCCTACT GGGTGCTGCC GGTGGTGACG CTCGCCCTGC CGCAGGTGGC GGTGATCGCG CGCCTCGTGC GCGGCGCGAC CATCGAGGCG CTGCGCTCGA ACCATGTCCG CACCGCCCGC GCCTATGGCC TGCCCGCCCG GACGGTGGTG GTGAAGCACG CGCTGCGCGC GGCCATGCTG CCGGCGGTGA GCTACCTCGG CCCCACGGCC GCGGGTCTCC TGACCGGCTC GGTCGTGGTC GAGACGATCT TCGGCCTGCC CGGCATCGGA CGCTACTTCG TGCAGGGCGC GCTCGGACGC GACTACACGC TCGTGATGGG GACCGTGGTG GTCATTGCCC TCTTCATCCT GCTCTTCAAC CTGATCGTGG ACCTGCTCTA CACGCTCCTC GACCCGCGGG TGCGCTATGA CTGA
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Protein sequence | MLRYTLRRLA SAVPTVFIIV TLTFFMIRLA PGGPFDLERP LDPLIMENLK RAYNLDGSLW SQYLTYMGNL MQGDLGPSFT KRDFTVNDLF ASGLPISMLL GGLAISLAVA IGTILGAIAA LRQNSWLDYT IVGLATFGIT TPNFVVAPLL SLFFGVILRW LPAGGWSSSD PAYWVLPVVT LALPQVAVIA RLVRGATIEA LRSNHVRTAR AYGLPARTVV VKHALRAAML PAVSYLGPTA AGLLTGSVVV ETIFGLPGIG RYFVQGALGR DYTLVMGTVV VIALFILLFN LIVDLLYTLL DPRVRYD
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