| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0125 |
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| Symbol | |
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| ID | 4896095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 138858 |
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| End bp | 139955 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640110708 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_001042017 |
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| Protein GI | 126460903 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.416541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGA CACCTTACTA TCTGATCGAC GCGGACAGGC TGCGGCAGAA CATGGCGGTC
GTGGACCGGC TGCGGCAGGC CTCGGGAGCG AAGGCGCTTC TGGCGCTGAA ATGCTTCGCC
ACCTGGCCCG CCTTCGAGCA TATGCGCGAC CATATGGACG GCACGACCTC CTCGTCGCTC
TACGAGCTGC GGCTCGGGCG CGAGAAGTTC GGCAAGGAGA CTCACGCCTA TTCCGTGGCC
TGGCCCGATC ACGAGATCGA CGAGGCCGTG GGCTATGCCG ACAAGATCAT CTTCAACTCG
GTGGGCCAGC TCGCGCGCTT CCGCAACCGC ACCGGGGGCA TCGCCCGCGG CCTGCGGCTG
AACCCGGGGC TCTCGACCTC GGGCTTCGAC CTGGCCGATC CGGCGCGGCC CTTCTCGCGC
TTGGGCGAAT GGAGCGCGGA GAAGATCGAG GCGGTGCTGC CCGACATCTC GGGCGTGATG
ATCCATTACA ATTGCGAGAA TGCCGATGTC GACCTGTTCG ACCGGCAGCT CTCCGAGATC
GAGGGCCGCT TCGGCGCGAT CCTCGACCGG CTGGACTGGG TGAGCCTCGG CGGCGGCATC
CATTTCACGG GCGAGGGCTA TCCGGTGGAC CGGCTGGCCG CGCGGCTGAA GGCCTTCGCC
GCGGCGCATG GGGTGCAGGT CTATCTCGAG CCGGGCGAGG CCGCGATCAC GCGCTCGGCC
ACGCTCGAGG TGACGGTGCT GGACCTGCTC GACAACGGCA AGCAGCTGGC CATCGTGGAC
AGCTCGGTCG AGGCGCATAT GCTGGATCTG CTGATCTACC GCCAGTCGGC CAAGGTTGAA
CCCGACGCCG GAGATCATAG CTACATGGTC TGCGGCAAGT CCTGCCTCGC GGGGGACATC
TTCGGCGAGT TCCGGTTCGC CCAGCCGCTG CAGGTGGGCG ACCGCCTCTC CATCGCGGAT
GCCGCGGGCT ACACGATGGT GAAGAAGAAC TGGTTCAACG GGGTGAAGAT GCCCTCGATC
GTGATCCGCG AGCCCGACGG ATCGCTGCGC GTGGCGCGCG AGTTCGGCTA TGGCGACTAT
GCCTCGAGCC TCGGCTGA
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| Protein sequence | MIQTPYYLID ADRLRQNMAV VDRLRQASGA KALLALKCFA TWPAFEHMRD HMDGTTSSSL
YELRLGREKF GKETHAYSVA WPDHEIDEAV GYADKIIFNS VGQLARFRNR TGGIARGLRL
NPGLSTSGFD LADPARPFSR LGEWSAEKIE AVLPDISGVM IHYNCENADV DLFDRQLSEI
EGRFGAILDR LDWVSLGGGI HFTGEGYPVD RLAARLKAFA AAHGVQVYLE PGEAAITRSA
TLEVTVLDLL DNGKQLAIVD SSVEAHMLDL LIYRQSAKVE PDAGDHSYMV CGKSCLAGDI
FGEFRFAQPL QVGDRLSIAD AAGYTMVKKN WFNGVKMPSI VIREPDGSLR VAREFGYGDY
ASSLG
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