Gene Rsph17029_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0093 
Symbol 
ID4897093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp106907 
End bp107755 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content64% 
IMG OID640110676 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001041985 
Protein GI126460871 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.251855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG CAGCCGCCGC GCGGATTTCG GTCTGGACCG TCCTGAAATG GGCCATAGCC 
ATCGCGATCG CCGTGATCAC CATCTTTCCG ATCTGGTGGA TGATCAACGT GGTCTTCTCG
CTGCCGGGCG AGCCGGTCGC CATCAACCCC CGGCTCTGGC CCACTTCGCT GTCGGCCGGG
CTCGAGAAGA TCGAGATGAT CTTCACCCAG ACGGGCTACC TGCGCGCCTA CGGCATCTCG
CTGGCCTATG CGCTGCTCAC GATCCTCGGC GTCCTCTTCA TAGGCTCGCT CGCGGCCTTC
GAATTCGCCC TGTTCGACTT TCCGGCCAAG GGCCCGATCT TCGGCATCGT GATGCTGTCG
CTGATGGTCC CCACGGCGGT GACCATCATC CCCACCTATC TGCTGACCTC GAACCTCGGC
TGGCTGAACT CGCTGCAGGG GCTGGTCGTC CCCGGTCTCG CCTCGGCCTT CGGCCTGTTC
ATGCTGGTGC AGTTCATGCG CGCCATTCCG AAGGACATGA TCGAGGCCGC GCGTCTGGAT
GGGGCCGGGC ATTTCCAGAT CTACTGGCAT GTCGCGCTGC CGCTCTGCCG CAACGCGCTG
GTCACGCTGG CCATCCTGAC CTTCATGCAG ACCTGGGGCA ATTACATGTG GCCGCTGATC
GTGACCACCT CGCCCGAGAT GTACACGGTC GGGCAGGTCG TGGGCATGTT CAACGCCCCC
CTCTCGCACC AGACGGTCGA TGTCGTGATG ACCGCCAACC TTCTCGCCGC CGTGCCGCCG
CTGCTGTTCT TCCTCATCTT CCAGCGGAAG ATCGTCGAGG GGATCGCGAT GTCGGGCACC
AAGGGCTGA
 
Protein sequence
MTSAAAARIS VWTVLKWAIA IAIAVITIFP IWWMINVVFS LPGEPVAINP RLWPTSLSAG 
LEKIEMIFTQ TGYLRAYGIS LAYALLTILG VLFIGSLAAF EFALFDFPAK GPIFGIVMLS
LMVPTAVTII PTYLLTSNLG WLNSLQGLVV PGLASAFGLF MLVQFMRAIP KDMIEAARLD
GAGHFQIYWH VALPLCRNAL VTLAILTFMQ TWGNYMWPLI VTTSPEMYTV GQVVGMFNAP
LSHQTVDVVM TANLLAAVPP LLFFLIFQRK IVEGIAMSGT KG