Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0093 |
Symbol | |
ID | 4897093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 106907 |
End bp | 107755 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640110676 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001041985 |
Protein GI | 126460871 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.251855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTG CAGCCGCCGC GCGGATTTCG GTCTGGACCG TCCTGAAATG GGCCATAGCC ATCGCGATCG CCGTGATCAC CATCTTTCCG ATCTGGTGGA TGATCAACGT GGTCTTCTCG CTGCCGGGCG AGCCGGTCGC CATCAACCCC CGGCTCTGGC CCACTTCGCT GTCGGCCGGG CTCGAGAAGA TCGAGATGAT CTTCACCCAG ACGGGCTACC TGCGCGCCTA CGGCATCTCG CTGGCCTATG CGCTGCTCAC GATCCTCGGC GTCCTCTTCA TAGGCTCGCT CGCGGCCTTC GAATTCGCCC TGTTCGACTT TCCGGCCAAG GGCCCGATCT TCGGCATCGT GATGCTGTCG CTGATGGTCC CCACGGCGGT GACCATCATC CCCACCTATC TGCTGACCTC GAACCTCGGC TGGCTGAACT CGCTGCAGGG GCTGGTCGTC CCCGGTCTCG CCTCGGCCTT CGGCCTGTTC ATGCTGGTGC AGTTCATGCG CGCCATTCCG AAGGACATGA TCGAGGCCGC GCGTCTGGAT GGGGCCGGGC ATTTCCAGAT CTACTGGCAT GTCGCGCTGC CGCTCTGCCG CAACGCGCTG GTCACGCTGG CCATCCTGAC CTTCATGCAG ACCTGGGGCA ATTACATGTG GCCGCTGATC GTGACCACCT CGCCCGAGAT GTACACGGTC GGGCAGGTCG TGGGCATGTT CAACGCCCCC CTCTCGCACC AGACGGTCGA TGTCGTGATG ACCGCCAACC TTCTCGCCGC CGTGCCGCCG CTGCTGTTCT TCCTCATCTT CCAGCGGAAG ATCGTCGAGG GGATCGCGAT GTCGGGCACC AAGGGCTGA
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Protein sequence | MTSAAAARIS VWTVLKWAIA IAIAVITIFP IWWMINVVFS LPGEPVAINP RLWPTSLSAG LEKIEMIFTQ TGYLRAYGIS LAYALLTILG VLFIGSLAAF EFALFDFPAK GPIFGIVMLS LMVPTAVTII PTYLLTSNLG WLNSLQGLVV PGLASAFGLF MLVQFMRAIP KDMIEAARLD GAGHFQIYWH VALPLCRNAL VTLAILTFMQ TWGNYMWPLI VTTSPEMYTV GQVVGMFNAP LSHQTVDVVM TANLLAAVPP LLFFLIFQRK IVEGIAMSGT KG
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