Gene Rsph17029_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0091 
Symbol 
ID4896170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp104675 
End bp105931 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content65% 
IMG OID640110674 
Productextracellular solute-binding protein 
Protein accessionYP_001041983 
Protein GI126460869 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA GGACAACCGC CGCCAGCCTC CTTGCGCTGG CCCTCGCCAC TGGCGGGACT 
GCGGCCGGCG CGCAGACCCT CGAATACTGG GTCTATTCCG ATTTCGCGCA GGGTGAGGCG
CTGGCGCTGC AGCAGGAGTT CATCAAGGAA TTCCAGGAGT CTCATCCGGG CGTGACGGTG
AACATCGTCG GCAAGGGCGA TGACGATCTG ACCGCCGGTC AGATCGCGGG GGCCGCCAGC
GGCAACCTGC CCGACGTGTT CATGAACGCG GTCGGCGTGG GCGCGCAGCT GGTCGATGTC
GGCGCTCTGG CGAACATCCA CGACAAGTGG ATGGCCATGC CCGAGGAGTT CCGCGCCCAG
TTCAACAAGG GTGCGGTCGA GAATTGCGCG CCCCGCCCCG AAGAGATGTA CTGCATTCCC
TACACCGGCT ATGGCACGCT GCTGTTCCGC AACCTGACGG TGCTGGAAGA GGCCGGGATC
GACACTTCCG CCCCGCCCGC CGACTGGGCC GACTGGCTGG CGCAGATGGA GAAGGTGAAG
GCCGCGGGCA AGTTCGCCAT TCCCGATCAG GCGCTGGTCT TCAACTCGAT CGCCGAGATG
TATGGCGTGA CGGGCGATGT CTCGACCTGG GGCATCGACT GGGAGAGCAA GACCACGCGG
ATCGACCCGG CGGTGATGAC CTCGGTGCTG GAGAAGTTCG TGGCGATGCA GCCGCTGACC
TCGGGCACCA GCCGCAACGA TCAGGCCACG AAGGACCTGT TCGTCACCGA TCAGCTGGCT
TTCCACACCA TCGGTCCGTG GGTGAACCCG ACCTATGTCG AGGCGGTCGA GAACTCGGGG
CTGAAGTACG ATTTCGTGCT GATGCCCGGC GAGACCGCCG ACAAGCACGG CGGTATCAAG
AACTTCGAGA TCGTGGGCGT CGCCCCGGGC GAAAACCTCG ATCTGGCCTT CGAATTCGCG
ACCTACATCA CCGCCAAGGA GCAGATGGCC CGCTGGGCCA AGCTGCTGTC GCGCTACAAT
TCGAACGATG CCGCGATGGC CGAGGCCGAT GTGGCAGCCC TGCCGCTGGT CGCCCGGTCG
GTTGCGGCGG TCGAGGTGAC GATGGATGTG AGCCCGCCCT ATCTGATCCA GCCGGTTCCT
GCCTGCTACC AGTCGACGGT GGTCGATTAT GTGTCCGCCA CCGCCGACGG CGAGTTCACG
CCCGAAGAGG GCGCGGCGGA GATGATCGCC GAGCTGAACG ACTGCCTCGC CGGCTGA
 
Protein sequence
MTMRTTAASL LALALATGGT AAGAQTLEYW VYSDFAQGEA LALQQEFIKE FQESHPGVTV 
NIVGKGDDDL TAGQIAGAAS GNLPDVFMNA VGVGAQLVDV GALANIHDKW MAMPEEFRAQ
FNKGAVENCA PRPEEMYCIP YTGYGTLLFR NLTVLEEAGI DTSAPPADWA DWLAQMEKVK
AAGKFAIPDQ ALVFNSIAEM YGVTGDVSTW GIDWESKTTR IDPAVMTSVL EKFVAMQPLT
SGTSRNDQAT KDLFVTDQLA FHTIGPWVNP TYVEAVENSG LKYDFVLMPG ETADKHGGIK
NFEIVGVAPG ENLDLAFEFA TYITAKEQMA RWAKLLSRYN SNDAAMAEAD VAALPLVARS
VAAVEVTMDV SPPYLIQPVP ACYQSTVVDY VSATADGEFT PEEGAAEMIA ELNDCLAG