| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0089 |
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| Symbol | |
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| ID | 4895258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 100998 |
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| End bp | 103097 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640110672 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001041981 |
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| Protein GI | 126460867 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.26085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA AACACCGGTC GATGCTGCTC GCAGGCGCGA GCACCATTGC TCTGGCCCCG
GCCGCCCTCT TCGCCCAGGA GGCGATCGAG CTCGACGCGA TCGTGGTCAC GGCCACCACC
GACGTCACAA CCCAGGCCGA TGGCTACAAG GCCGACTACA ACCAGTCCGC CACCAAATCC
GACACCCCCG TGGCCGAGAC GACCCAATCG GTCTCGGTCG TGACGGCAGA GCAGATCAAG
GATCAGGGCG CGGAAACCCT CGGGCAGGCG CTCCGCTACA GCCCCGGCGT GCTCGGCGAC
CCCTACGGCG TCGATCCGCG CTTCGACAGC CCCACGATCC GCGGCTTCGA GGCGCGCGGC
TCGCAATATG TCAACGGCCT GCGGCAGCTG CGCTACATGG GTGCCCCGGC CTACGAGACC
TTCGCGCTCC AGCAGATCGA GGTGCTGAAC GGTCCCAACT CCTCGCTCTA TGGCGCGGGC
TCGCCGGCCG GGATCATCAA CCAGGTCCAG AAACGCGCGC AGGGCTTCGA CTTCGGCGAA
CTGGGCGTGG GCCTCGACGA CAACGGCTCG CGCCAGAGCT TCTTCGACTG GAACCGCACG
GTGAGCGACA CGCTCTCGTT CCGCGCGACC GGGATCGCCA AGGACTACGA GAGCCAGGTG
GAGGAGATCG GCCTCGAACG CGGGTATCTG GGCCTCGCCG CCCGCTGGAA GCCCACCGAC
CGCACCACGC TCGACATCAT CTCCTCCTAT ACCGACGACG CGCCGACTTC GCCGCCGGGC
ATCCCCTTCG CGCTCACCGG GCAGGGGAAC GACAAGTATC TGCGCGAGCT CTACACCGGC
GAGCCGGGCT GGGACGACCA TGACCGCCAG ATCTTCAACA TCGGCTACGA GCTGAGCCAC
GAGTTCGACA GCGGCTGGAC CTTCAGCCAG GGCTTCCGCT ACGAGAAGTT CGACTGGGAA
TATACCGGCC ACTATGTGAC CGGCATCGAC GCCAGCGGCA CCGGGATCAC CCGGGGCGCC
AACTATCAGC GCGAGAACAC CACCGGCCTG AGCCTCGATT CACGGCTTGC CGGAGAGGTG
CTGACCGGCG GCATGGAGCA CAAGCTGCTC TTCGGGCTCG ACCTGCGCAA ATACGACGCC
GACACCGTCA CCGAGTTCTA CAACGCCACC GGCGGCGTCA CGAACCTCGA CTGGCGTAAC
CCGATCTATG GCGGCGTTCC CACCGGCGCG CCCTGGTATG TCAGCACGCC CGACGTGACG
CAGACCCAGA TCGGCCTCTA CGCGCAGGAC GAGATCACCG CCGGGCGCTG GCGCGGGTCG
ATCGCGCTGC GCCACGACTG GTCGAAGCAG GAGGGCACGA CCTACACGAA CTTCGCGGGC
GAAGGCGAGA TCGACCAGTC GGACAAGGCG CTGTCGGGTC GCGCGGGCCT TGGCTACGAG
ATCGCGCCCG GCGCGCTCGT CTATGCCAAC TACTCCACCT CCTTCGACCC GGAGATCGGC
GTGGACGGCG CGGGCGAGCA GCTGGAGCCG ACGACCGGCA AGCAATGGGA GCTGGGCGTG
AAATATCAGC CCGACAGCTT CAACGCGCTC TTCACTGCGG CGATCTACGA TCTGCGGCAG
GAGAACCTGA CGGTGAATCT CGGCGGGGCC GAGGGCCGTC GTCAGGTCGG CGAGGTCAAG
TCCTCCGGCC TTGAACTCGG CGCGGTGGGC GAGCTGGCAC CGGGGCTGAA CCTGCGCGCA
AGCTACGCCT ACAACGACAC CGAGCAGGTC GATCCGAGCG GCGCCAACGA CGGCAACGAG
ATGCCCAACG CGCCGCGCCA TCTGGCGAGC CTCTGGCTCG ACAAGGCCTT CGACAACGGC
GTGAGCCTCG GCGGCGGCCT GCGCTACATC GGCGAGCGCG AGGGCGATCT GGCCAACCTC
TATTCGCTCG ACTCCGTGAC GCTGCTCGAC CTCGCCGTGG GCTACAGCCG CGAGAACATG
GAGGCCTCGA TCAACCTCAA CAACCTGTCC GACGAGGTCT ACCTCGCCAA CTGCGGCTCC
TTCGGCTGCT ACTACGGCGA GGGCCGGACG ATCTCGGCCA AGATCAGCTA CAAGTGGTAG
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| Protein sequence | MKTKHRSMLL AGASTIALAP AALFAQEAIE LDAIVVTATT DVTTQADGYK ADYNQSATKS
DTPVAETTQS VSVVTAEQIK DQGAETLGQA LRYSPGVLGD PYGVDPRFDS PTIRGFEARG
SQYVNGLRQL RYMGAPAYET FALQQIEVLN GPNSSLYGAG SPAGIINQVQ KRAQGFDFGE
LGVGLDDNGS RQSFFDWNRT VSDTLSFRAT GIAKDYESQV EEIGLERGYL GLAARWKPTD
RTTLDIISSY TDDAPTSPPG IPFALTGQGN DKYLRELYTG EPGWDDHDRQ IFNIGYELSH
EFDSGWTFSQ GFRYEKFDWE YTGHYVTGID ASGTGITRGA NYQRENTTGL SLDSRLAGEV
LTGGMEHKLL FGLDLRKYDA DTVTEFYNAT GGVTNLDWRN PIYGGVPTGA PWYVSTPDVT
QTQIGLYAQD EITAGRWRGS IALRHDWSKQ EGTTYTNFAG EGEIDQSDKA LSGRAGLGYE
IAPGALVYAN YSTSFDPEIG VDGAGEQLEP TTGKQWELGV KYQPDSFNAL FTAAIYDLRQ
ENLTVNLGGA EGRRQVGEVK SSGLELGAVG ELAPGLNLRA SYAYNDTEQV DPSGANDGNE
MPNAPRHLAS LWLDKAFDNG VSLGGGLRYI GEREGDLANL YSLDSVTLLD LAVGYSRENM
EASINLNNLS DEVYLANCGS FGCYYGEGRT ISAKISYKW
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