Gene Rsph17029_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0087 
Symbol 
ID4895346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp98132 
End bp100108 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content75% 
IMG OID640110670 
Productiron-hydroxamate transporter permease subunit 
Protein accessionYP_001041979 
Protein GI126460865 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component
[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCC CCGCGCAGCT GGCGCTGGCG GGCGTGGGCC TCCTCGCGGC CGCGCTCTGG 
GCCTGGGCTG CGGTGGGCCT CCTGCCCCTC GGCTCCTGGC CGCCGCTGCC CTTCCGGGCC
GAGGCGATGA GCCTCGAGCA GATCCTGCTG GCCTTCGGCC TGATGCCGCG CGGAACCGTA
GCGCTTCTGG CCGGGGCGGC GCTCGGCCTG TCGGGCGCGC TCCTGCAGAC CGTGCTGCGC
AACCCGGTGG CCGATCCCAC CACGCTCGGG ATCTCGTCGG GTGCGCAACT GGCCCTCGTC
CTCTCCACCA TCTTCGCGCC CACCCTGCTC GTCGACGGGC GCTGGCCGGT GGCCATGGCC
GGGGCGGCGC TGGCGGCGGC GCTGGTTCTG GCGGTCGGCG CGCGGCGGGC CTTCGCGCCG
GTCACGATGG TGATCGTGGG CATGCTGGTG AGCCTCACGG CAAGCGCCAT CGCCACCGCC
CTGACCCTCG CGCAGGGCGA ATATCTGCTG TCGCTCGTCA TCTGGAACGG CGGTTCTCTG
GTGCAGCAGG ACTGGTCGGG CGTGCGGGCG CTGGCGCTGG TGCTGGCGTC AGGCGGCCTT
GCCGCGGCGC TTCTGGCGCG TCCGCTCCGC GTGCTCTCGC TCGGGGCCGA GGGCGCCGCG
AGCCTCGGGC TCCGGGTGGC GGCGGTCCGG CTGGCGGGCA TCGCGGTGGC GGTGATCCTC
GCCGGGTCGG TCTCGGCCGA GCTCGGTCTG ATCGGCTTCG TGGGCCTCGC GGGGCCGGCC
CTCGCGCGCA GTCTGGGCGC CCGGACCATC CCGGAGCGGC TCCTGCTCTC GTCGCTGATC
GGGGCGCTGC TCCTGTCGCT CTGCGACGGG GTGGTGCTCA CCGTGGCGGG GGCAAGCGGC
GAGATGTTCC CGACCGGCGC ACTCACCGGG CTGATCGGCG GGCCGCTCCT GATTTGGCTC
CTGCCACGCC TGCGCGGCTC CACCCCGCCC GGCACCGAGG CGGCCGAGGG TCCCGCAGTC
CGCCTCGCCC GTCCGCGGCC GGTGCTCCTC GCGCTCGCGG CAACGCTCGT CGCGGTTTCC
CTGGCCCTTG TCTGGATCGG CCGCGTTCCG GGCGGCTGGG TCATCCTCGA CACGCAGAGC
TTTGCGGATT TCCTGCCGAT GCGCCTGCCC CGGCTCATCG CGGCCGCTTC GGCCGGCGCG
GCGCTGGCCA CCGCAGGCGC GCTTCTGCAG CGGCTGACGG GCAACCCGCT GGCCTCGCCC
GAGGTTCTGG GCGTTTCGGG CGGCGCGGCT CTGGGCTATG CCCTCGCGAT CTATCTCGTC
GTGGCACCGA CGGCACCTCT GCTCCACGCC GCAACGATGG CGGGCGGCGT GATCGCGCTG
GCCCTGGTCG CGGCCTATCT CCTGCGCCGC GAGATGCCGG CCGAGCGCAT CCTCCTCGCC
GGCATCGCGG TCTCGGCGCT GGCCTCGGCG GTGCTGTCGG CGATGATGGC CTCGGGCGAC
GCGCGCTCCT GGGCGGTTCT GGCCTGGCTC AGCGGCTCGT CCTCGGCGGT GCTGATGCCC
GGAGCGCTGG CTCTGGCCGC GGTGGCGCTG ACGCTCTGGG CCGCGGCGCT CGCCACGGCG
CGCTGGCTCG CGATCCTGCC GCTCGGCCCC GGGGTGGCGG GCGGCCTCGG CCTGCCGCTC
CGGCGGGCCC GCGTCGCGCT TATTCTTCTT GCGGGGCTCG CCACCGGCGC GGCCACCGTG
CTCGTGGGCC CGCTCAGCTT CGTGGGCCTC ATGGCGCCGC ACATGGCGCG CCGCGCAGGT
CTGGCCCGCC CCGCCCATCA CGTCACCGGC GCGGCCCTGA TCGGCGCCCT GCTCATGCTG
CTGGCCGATT TCGGCGCGCG CGTGGCGGGC TTTCCCTACG AACTTCCCCT CGGCCTCTTC
GCCTCGCTCA TCGGGGCGCC GTGGCTTCTG TGGTTACTGA TGCGAGCCAA CCGATGA
 
Protein sequence
MSRPAQLALA GVGLLAAALW AWAAVGLLPL GSWPPLPFRA EAMSLEQILL AFGLMPRGTV 
ALLAGAALGL SGALLQTVLR NPVADPTTLG ISSGAQLALV LSTIFAPTLL VDGRWPVAMA
GAALAAALVL AVGARRAFAP VTMVIVGMLV SLTASAIATA LTLAQGEYLL SLVIWNGGSL
VQQDWSGVRA LALVLASGGL AAALLARPLR VLSLGAEGAA SLGLRVAAVR LAGIAVAVIL
AGSVSAELGL IGFVGLAGPA LARSLGARTI PERLLLSSLI GALLLSLCDG VVLTVAGASG
EMFPTGALTG LIGGPLLIWL LPRLRGSTPP GTEAAEGPAV RLARPRPVLL ALAATLVAVS
LALVWIGRVP GGWVILDTQS FADFLPMRLP RLIAAASAGA ALATAGALLQ RLTGNPLASP
EVLGVSGGAA LGYALAIYLV VAPTAPLLHA ATMAGGVIAL ALVAAYLLRR EMPAERILLA
GIAVSALASA VLSAMMASGD ARSWAVLAWL SGSSSAVLMP GALALAAVAL TLWAAALATA
RWLAILPLGP GVAGGLGLPL RRARVALILL AGLATGAATV LVGPLSFVGL MAPHMARRAG
LARPAHHVTG AALIGALLML LADFGARVAG FPYELPLGLF ASLIGAPWLL WLLMRANR