Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0083 |
Symbol | |
ID | 4896250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 95114 |
End bp | 95773 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640110666 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001041975 |
Protein GI | 126460861 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.201393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGA CAGACACCCC TCCATCGGTT CCCCAGAAGC CCCGCCGCGG CCGTCCGCGT GGCGCTCCGG ATGCGTCCCT CGCTCATCAA AGCCTTATTC GCGCCGGCCT CGAACATCTG ACCGAGAAGG GATATTCTTC GGTCGGAGTC GATGAGATCC TGAAGGCAGC AAGAGTTCCC AAGGGGAGCT TCTATCACTA CTTTCGCAAC AAGGCCGATT TCGGCCTGGC TCTCATCGAA GCTTACGACA CCTATTTCGC CAGGCTTCTG GATCAGGCTT TCCTCGATGG AAGCCTCGCG CCGTTGGCAC GGCTGCGCCT CTTCACCAGG ATGGCCGAAG AGGGCATGGC CCGCCACGGC TTCCGGCGCG GATGCCTCGT CGGCAACCTG GGCCAGGAGA TGGGGGCGCT GCCCGACGAC TTCCGCGCTG CGCTCATCGG GGTTCTGGAG ACATGGCAGA GACGCACGGC GCAGCTCTTC CGGGAGGCGC AGGCCTGCGG AGAGCTGTCC GCGAATCATG ACCCCGACGC CCTTGCCGAG GCGTTCTGGA TCGGATGGGA GGGCGCGATC CTGCGCGCCA AGCTCGAGCT GCGCCCCGAC CCGCTGCACA GTTTCACCCG GACGTTCGGT CGCCATTTCG TGACCCGGAC ACAGGAATAA
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Protein sequence | MPLTDTPPSV PQKPRRGRPR GAPDASLAHQ SLIRAGLEHL TEKGYSSVGV DEILKAARVP KGSFYHYFRN KADFGLALIE AYDTYFARLL DQAFLDGSLA PLARLRLFTR MAEEGMARHG FRRGCLVGNL GQEMGALPDD FRAALIGVLE TWQRRTAQLF REAQACGELS ANHDPDALAE AFWIGWEGAI LRAKLELRPD PLHSFTRTFG RHFVTRTQE
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