| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0076 |
|---|
| Symbol | |
|---|
| ID | 4896937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 85096 |
|---|
| End bp | 85566 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640110653 |
|---|
| Product | beta-Ig-H3/fasciclin |
|---|
| Protein accession | YP_001041968 |
|---|
| Protein GI | 126460854 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.268608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAA CCCTTCTCGC CCTTTCGCTC GGACTGCTCG CGGCACCTGC CTTCGCCGAA
ACCGGAGACA TCGTGAAGAC CGCCACCGGC GCGGGCAGCT TTACCACGCT CCTCACCGCG
GCCGAGGCCG CAGGGCTCGT CGATACGCTG AAGGGCGAGG GCCCCTTCAC CGTCTTCGCG
CCGACGGATG CGGCCTTCGC GGCCCTGCCC GAGGGCACGG TCGAGGATCT GCTGAAGCCC
GAGAACAAGG AGAAGCTGAC CGAGATCCTG ACCTATCACG TCGTGCCGGG CGAGGTGATG
TCCTCGGATC TGACGGAAGG CATGACCGCC GAGACGGTGG AGGGCGGCGC GCTCACCGTC
ACGCTCGAAG GCGGCCCGAA GGTGAATGGC GTGGCGATCT CGCAGCCGGA TGTGGACGCG
TCGAACGGGG TGATCCATGT GATCGACGGC GTGCTGATGC CGGGCGCCTG A
|
|---|
| Protein sequence | MRKTLLALSL GLLAAPAFAE TGDIVKTATG AGSFTTLLTA AEAAGLVDTL KGEGPFTVFA
PTDAAFAALP EGTVEDLLKP ENKEKLTEIL TYHVVPGEVM SSDLTEGMTA ETVEGGALTV
TLEGGPKVNG VAISQPDVDA SNGVIHVIDG VLMPGA
|
|---|
| |