Gene Rsph17029_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0062 
Symbol 
ID4897640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp72268 
End bp73605 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content64% 
IMG OID640110638 
Productcytochrome b/b6 domain-containing protein 
Protein accessionYP_001041954 
Protein GI126460840 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.422457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAA TCCCTCACGA CCATTACGAG CCGCGGACGG GCATCGAGAA GTGGCTGCAC 
AGCCGGCTGC CGATTGTCGC GCTGGCTTAT GACACCATCA TGATCCCCAC CCCCAGAAAC
CTGAACTGGA TGTGGATCTG GGGCGTCGTC CTCGCCTTCT GTCTCGTGCT GCAGATCGTC
ACCGGCATCG TGCTTGCGAT GCATTACACG CCGCATGTCG ACCTGGCCTT CGCCTCGGTC
GAGCACATCA TGCGCAACGT GAACGGCGGC TTCATGCTGC GCTACCTGCA TGCGAACGGC
GCCTCGCTGT TCTTCATCGC GGTCTATCTG CACATCTTCC GCGGCCTCTA CTACGGCAGC
TACAAGGCGC CGCGCGAGGT CACCTGGATC GTGGGGATGC TCATCTATCT CGCGATGATG
GCGACCGCCT TCATGGGCTA CGTGCTGCCG TGGGGCCAGA TGTCCTTCTG GGGCGCCACC
GTGATCACCG GCCTCTTCGG CGCGATCCCG GGCATCGGCC ATTCGATCCA GACCTGGCTG
CTCGGCGGCC CGGCGGTGGA CAATGCCACG CTCAACCGCT TCTTCTCGCT GCACTACCTG
CTGCCCTTCG TGATCGCGGC CCTTGTGGCC ATCCACATCT GGGCCTTCCA CTCGACGGGC
AACAACAACC CGACCGGCGT CGAAGTGCGC CGCACCTCGA AGGCGGAAGC CCAGAAGGAC
ACGGTTCCGT TCTGGCCCTA CTTCATCATC AAGGACGTCT TCGCCCTGGC CGTCGTCCTG
CTGGTGTTCT TCGCCATCGT GGGCTTCATG CCGAACTACC TCGGCCACCC CGACAACTAC
ATCGAGGCGA ACCCGCTCTC GACGCCCGCG CACATCGTGC CGGAATGGTA CTTCCTGCCC
TTCTACGCGA TCCTGCGCGC CTTCACCGCC GACGTCTGGG TGGTGCAGAT CGCCAACTTC
ATCAGCTTCG GCATCATCGA CGCCAAGTTC TTCGGCGTGC TCGCGATGTT CGGCGCGATC
CTCGTGATGG CGCTGGTGCC GTGGCTCGAC ACCTCGCCGG TGCGGTCGGG GCGCTACCGC
CCGATGTTCA AGATCTACTT CTGGCTGCTC GCGGCGGACT TCGTGATCCT GACCTGGGTC
GGCGCCCAGC AGACCACCTT CCCCTACGAC TGGATCTCGC TGCTCGCATC GGCCTACTGG
TTCGCCTACT TCCTGGTGAT CCTGCCGATC CTCGGCGCGA TCGAGAAGCC GGTGGCTCCG
CCCGCGACCA TCGAAGAAGA CTTCAACGCC CACTACTCGC CGGCGACCGG CGGCACGAAA
ACGGTCGTGG CAGAGTAA
 
Protein sequence
MSGIPHDHYE PRTGIEKWLH SRLPIVALAY DTIMIPTPRN LNWMWIWGVV LAFCLVLQIV 
TGIVLAMHYT PHVDLAFASV EHIMRNVNGG FMLRYLHANG ASLFFIAVYL HIFRGLYYGS
YKAPREVTWI VGMLIYLAMM ATAFMGYVLP WGQMSFWGAT VITGLFGAIP GIGHSIQTWL
LGGPAVDNAT LNRFFSLHYL LPFVIAALVA IHIWAFHSTG NNNPTGVEVR RTSKAEAQKD
TVPFWPYFII KDVFALAVVL LVFFAIVGFM PNYLGHPDNY IEANPLSTPA HIVPEWYFLP
FYAILRAFTA DVWVVQIANF ISFGIIDAKF FGVLAMFGAI LVMALVPWLD TSPVRSGRYR
PMFKIYFWLL AADFVILTWV GAQQTTFPYD WISLLASAYW FAYFLVILPI LGAIEKPVAP
PATIEEDFNA HYSPATGGTK TVVAE