Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0061 |
Symbol | |
ID | 4897547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 71393 |
End bp | 72250 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640110637 |
Product | cytochrome c1 |
Protein accession | YP_001041953 |
Protein GI | 126460839 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.197339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA AACTCACTCT CACAGCCGCC ACGGCGCTCG CCCTCTCGGG CGGCGCGGCG ATGGCGGCCG GCGGCGGCCA TGTCGAGGAC GTGCCCTTCT CGTTCGAGGG CCCGTTCGGA ACCTTCGACC AGCACCAGCT CCAGCGGGGC CTGCAGGTCT ATACCGAGGT CTGCGCGGCC TGCCACGGGA TGAAGTTCGT CCCGATCCGC AGCCTGTCGG AACCGGGCGG CCCCGAGCTG CCCGAGGATC AGGTCCGGGC CTATGCCACG CAGTTCACCG TGACCGACGA GGAAACGGGT GAGGACCGCG AGGGCAAGCC CACCGACCAC TTCCCCCATT CGGCGCTGGA GAACGCGCCC GACCTCTCGC TCATGGCGAA GGCGCGGGCG GGCTTCCACG GCCCGATGGG CACCGGCATC AGCCAGCTCT TCAACGGCAT CGGCGGCCCG GAATACATCT ACTCGGTGCT GACGGGCTTC CCGGAAGAGC CGCCGAAATG CGCCGAAGGC CATGAGCCGG ACGGGTTCTA CTACAACCGC GCCTTCCAGA ACGGCTCGGT TCCGGACACC TGCAAGGACG CGAACGGCGT GAAGACCACC GCCGGCTCGT GGATCGCCAT GCCGCCTCCG CTCATGGACG ATCTGGTGGA ATATGCCGAC GGCCACGACG CCAGCGTTCA TGCGATGGCC GAAGACGTCT CGGCCTTCCT GATGTGGGCG GCCGAGCCGA AGCTGATGGC CCGCAAGCAG GCCGGCTTCA CCGCCGTCAT GTTCCTGACC GTGCTGTCGG TGCTGCTCTA CCTCACGAAC AAGCGGCTCT GGGCCGGCGT GAAGGGCAAG AAGAAGACGA ACGTCTGA
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Protein sequence | MIRKLTLTAA TALALSGGAA MAAGGGHVED VPFSFEGPFG TFDQHQLQRG LQVYTEVCAA CHGMKFVPIR SLSEPGGPEL PEDQVRAYAT QFTVTDEETG EDREGKPTDH FPHSALENAP DLSLMAKARA GFHGPMGTGI SQLFNGIGGP EYIYSVLTGF PEEPPKCAEG HEPDGFYYNR AFQNGSVPDT CKDANGVKTT AGSWIAMPPP LMDDLVEYAD GHDASVHAMA EDVSAFLMWA AEPKLMARKQ AGFTAVMFLT VLSVLLYLTN KRLWAGVKGK KKTNV
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