| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0060 |
|---|
| Symbol | |
|---|
| ID | 4897481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 70648 |
|---|
| End bp | 71343 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640110636 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001041952 |
|---|
| Protein GI | 126460838 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.740621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCATC TTGACCGCCT GCTGATCCGG CAGGGCGATT TCACGCTCCG CGCCGATGCC
ACGGCCTGCG CGGGCGAGCG GATCGCGGTG ATCGGGCCGT CGGGCGGGGG CAAGTCCACG
CTCCTCATGG CGATCGCGGG CTTCCTCGCC CCGGCCGAGG GGCGCATCCT CTGGCAGGGC
CGGGATCTCG GCCCGCTCGG TCCCGGCGAG CGGCCGGTGA GCCTTCTGTT TCAGGACCAG
AATCTCTTCC CGCATCTCAC GCTGCGTGAA AATCTGGGGC TCGGGATCTC GCCCGCCCTG
CGGCTTGCGG CCGGCGACCG CGCGCGGATC GCCGAGGCGC TGGAGCGTGT GGGTCTTGCG
GGTCTCGGGG AGGCGAAGCC GGGGCGGCTC TCGGGCGGGC AGCAGGGGCG GGCGGCGCTG
GCCCGGGCGC TCCTGCGGGC GCGGCCGATC CTGCTCCTCG ACGAGCCCTT CGCCGCGCTC
GGACCCGCGC TCAAGGCCGA GATGCTGGCG CTCGTCTCCG AGATCGCCGC CGAGACCGGG
GCCACGGTGC TGATGGTCAC GCACGACCCC GAGGATGCGC GCCGCTTCGC CCACCGCACC
ATCCTCGTGG CGGACGGTCG GGCCGAGGCG CCGCAGCCGA CGGCGGCGCT TTTCGCCGAT
CCGCCGCCGG CACTCCGCGC CTACCTCGGC CCCTGA
|
|---|
| Protein sequence | MLHLDRLLIR QGDFTLRADA TACAGERIAV IGPSGGGKST LLMAIAGFLA PAEGRILWQG
RDLGPLGPGE RPVSLLFQDQ NLFPHLTLRE NLGLGISPAL RLAAGDRARI AEALERVGLA
GLGEAKPGRL SGGQQGRAAL ARALLRARPI LLLDEPFAAL GPALKAEMLA LVSEIAAETG
ATVLMVTHDP EDARRFAHRT ILVADGRAEA PQPTAALFAD PPPALRAYLG P
|
|---|
| |