Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0059 |
Symbol | thiP |
ID | 4897398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 69147 |
End bp | 70661 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640110635 |
Product | thiamine transporter membrane protein |
Protein accession | YP_001041951 |
Protein GI | 126460837 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGAC GCGCTGGCGC GCTGATCGTC GCCGCGGCGC TGGCCGCGCT GACGCTGGGC CCGCTCGCGC TCGTGATGGC GCGGGCGGGC GGCGGCGCGC TCGGTCCGGC GGACTGGGCG GCAGTGCGCT TCACCGTCCT GCAGGCGGCA CTGTCTGCGG TGGTCTCGGT TCTGCTGGCG GTGCCGGTGG CCCGCGCGCT CGCCCGCCGC ACCTTCCCCG GCCGTCGGCT GATGATCGCG CTGCTGGGCG CGCCCTTCCT GCTGCCGGTG ATCGTGGCGG TCCTTGGGCT GATCGCGGTT TTCGGCCGGG CGGGGCTGCT GAACCGGGGG CTCGAGGCCG TGGGCCTGCC CGCCCTTTCG ATCTACGGGC TCCACGGTGT CGTGCTGGCC CATGTCTTCT TCAACATGCC CTTCGCGGTG CGGCTGATCC TGCAGGGCTG GCTCGCGATC CCGTCCGAGC GTTTCCGGCT GGCGGCCGCG CTCGGCTTCC GGCCGGCCGA TGTGGCGCGG CATCTGGAAT GGCCGATGCT GCGGGCGGTG GTGCCGGGCG TGGCGCTGGT GGTCTTCGTG ATCTGCCTGT CGAGCTTCGC CGTGGCCCTG ACGCTGGGCG GCGGCCCGCG GGCCACGACG GTGGAGCTTG CGATCTATCA GGCCCTGCGG TTCGAGTTCG ACCTGGGCCG CGCGGCGCTG CTGGCTGCGC TGCAATTCGC ACTCTGCGGG GCTGCGGTGC TGGCCACCGG CGTCCTGTCG CTGCCCTCGG CCTTCGGCGC AGGGCTCGAC CGCGCGCCGG TGCCCCTCGC GCCGGGGGGC TGGCGGCGCG GGGCGGATGG CATGGCGCTG GCGCTGGCCG CGGCCTTCCT CCTTCTGCCG CTCGGCATGG TCGCCGCGCG CGGGGCGCCG GGGCTTCTCC ATCTGCCGTC CGATGTCTGG GCCGCGGCGG CGCGGTCGCT CGCGGTGGCA CTGCCCTCGG CCGCCCTCTC GGTGACCGGC GCGCTGGTGC TGGCGCTGGC GGGCCCGCGC TTCGGGCTGG TGGCAACCCT GCCGCTCGCC GCCTCCTCGC TCGTCCTCGG CACCGGGCTG TTCCTTGCTG TCCATCCCGT CCTCAATCCG ACGCTGGTCG CGCTGCCGGT GACGATGCTC GTCAATGCCA CGCTCACTCT GCCCTTCGCC TACCGCATCC TCGCACCCGA GGCGCGCGCG CTTGAGGCCG ATTACGGCCG GCTCGCCGCG GCTCTAGGCC TTGGCGGCAT GGCGCGGTTG CGCTGGCTCA CGCTGCCGCG GTTGCGCCGT CCGCTGGGTT TCGCTCTGGG CGTGGCGTCG GCGCTGGCGA TGGGGGATCT GGGCGTCATC GCGCTCTTTG CCGCCGAGGG GGGCGCCACG CTGCCGCTTC TCGTTCAGCG GCTGATGGGT GCCTACCGGC TGGAAGAGGC GGCGGGGGCG GCGCTGCTTC TGGTGCTCAC GAGCTTCGCC CTCTTCTGGA TCTTCGACCG CGGAGGCCGC CATGCTGCAT CTTGA
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Protein sequence | MARRAGALIV AAALAALTLG PLALVMARAG GGALGPADWA AVRFTVLQAA LSAVVSVLLA VPVARALARR TFPGRRLMIA LLGAPFLLPV IVAVLGLIAV FGRAGLLNRG LEAVGLPALS IYGLHGVVLA HVFFNMPFAV RLILQGWLAI PSERFRLAAA LGFRPADVAR HLEWPMLRAV VPGVALVVFV ICLSSFAVAL TLGGGPRATT VELAIYQALR FEFDLGRAAL LAALQFALCG AAVLATGVLS LPSAFGAGLD RAPVPLAPGG WRRGADGMAL ALAAAFLLLP LGMVAARGAP GLLHLPSDVW AAAARSLAVA LPSAALSVTG ALVLALAGPR FGLVATLPLA ASSLVLGTGL FLAVHPVLNP TLVALPVTML VNATLTLPFA YRILAPEARA LEADYGRLAA ALGLGGMARL RWLTLPRLRR PLGFALGVAS ALAMGDLGVI ALFAAEGGAT LPLLVQRLMG AYRLEEAAGA ALLLVLTSFA LFWIFDRGGR HAAS
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