| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91526 |
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| Symbol | FDH1.1 |
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| ID | 4840932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 433751 |
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| End bp | 435044 |
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| Gene Length | 1294 bp |
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| Protein Length | 379 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640392247 |
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| Product | dehydrogenase-like protein |
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| Protein accession | XP_001386477 |
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| Protein GI | 126139910 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.901315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.121325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTTTCACTCC CCCAATTTTC ACTATGTCCA AAGGTAAGGT TTTGTTGGTT CTCTACCAAG
GTGGCGAACA TGCCAGACAA GAAAAGAAGT TATTAGGTTG CGCCGAAAAC GAATTAGGAA
TTCGTAAGTT TGTCGAAGAC AACGGTTATG AATTGGTGAC CACCTCGAAC AAGGACCCAG
AACCAAACTC GGTTCTTGAC AAGGAACTTG CTGACGCCGA AATCGTCATC ACCACTCCTT
TCTTCCCTGG TTACATTACC AAAACCAGAA TTGCAAAGGC TCCAAAGTTG AAGATTGCCA
TCACTGCTGG TGTTGGTTCT GACCACGTTG ATCTTAACGC AGCCAACGAA AGAAAGATCA
CTGTTGCTGA AGTCACCGGT TCCAACGTGC AATCTGTTGC TGAACATGTT CTCATGACCA
TGTTGGTTTT GGTAAGAAAT TTCGTCCCAG GCCATCAACA AGCCATTTCT GGTCAGTGGG
ATATTGCTGG CGCTGCAAAG CAAGAATTCG ACATGGAAGA CAAAGTCTTC TCAACAGTTG
GCGCTGGTAG AATTGGTTAC CGTGTCTTGG AAAGATTGAT TGCATTTAAC CCCAAGAAGT
TGTACTACTA CGACTACCAA GACTTGCCAG TTGAAGCAGT TCAGAAGTTG AACGAAGTTT
CCAAGATCCT CAATGGTAGA GACAACATTG TCGAAAGAGT TGAAAGTCTT GAAGAAATGG
TTTCGAAGTC TGATGTCGTC ACCATTAACT GTCCATTGCA TGAAAAGTCC AAGGGCTTGT
TCAACAAGGA ATTGATTTCA AAGATGAAGA AGGGATCTTA TTTGGTCAAC ACTGCTAGAG
GTGCCATCTG TGTTGCAGAA GATGTAGCTG CCGCACTTGA ATCTGGTCAC TTGGCTGGCT
ACGGTGGTGA TGTCTGGAAC CAACAGCCTG CTCCTGCTGA CCATCCATGG AGATCTATGA
CTAATCCATA TGGCTACGGT AATGCCATGA CACCACATGT CTCTGGTACC TCTCTTGATG
CCCAGGCAAG ATATTCCGAA GGAGTCAAAA ACATCTTGAA AGAGTACTTC TCTGGAAGAG
AGAACTACAG ACCTCAAGAT GTAATTGTCA TCGACGGTGA TTATGCTACC AAATCCTATG
GTCAAAGAAA TTTAATCGCC TGAAAATTCA ACGAATGTTG TTTACGTTTT TGTTTTAGAT
CCCTTTATTA TTCACTAGTT TTTTTGCTAT TCGAGTTTTT ATCTAGTGAT TGAATAACTT
TATATATGAA ATTTGATGAA CCTTTTAAGA CTTG
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| Protein sequence | MSKGKVLLVL YQGGEHARQE KKLLGCAENE LGIRKFVEDN GYELVTTSNK DPEPNSVLDK
ELADAEIVIT TPFFPGYITK TRIAKAPKLK IAITAGVGSD HVDLNAANER KITVAEVTGS
NVQSVAEHVL MTMLVLVRNF VPGHQQAISG QWDIAGAAKQ EFDMEDKVFS TVGAGRIGYR
VLERLIAFNP KKLYYYDYQD LPVEAVQKLN EVSKILNGRD NIVERVESLE EMVSKSDVVT
INCPLHEKSK GLFNKELISK MKKGSYLVNT ARGAICVAED VAAALESGHL AGYGGDVWNQ
QPAPADHPWR SMTNPYGYGN AMTPHVSGTS LDAQARYSEG VKNILKEYFS GRENYRPQDV
IVIDGDYATK SYGQRNLIA
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