| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91503 |
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| Symbol | TAF12 |
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| ID | 4840894 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 615608 |
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| End bp | 617980 |
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| Gene Length | 2373 bp |
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| Protein Length | 520 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640392209 |
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| Product | Transcription initiation factor TFIID subunit 12 (TBP-associated factor 12) (TBP-associated factor 61 kDa) (TAFII-61) (TAFII61) (TAFII-68) (TAFII68) |
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| Protein accession | XP_001386520 |
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| Protein GI | 150866801 |
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| COG category | [K] Transcription |
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| COG ID | [COG5624] Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0374369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.805326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGAC TTCCTGGTCT GAGTGGACAG AGAAACCCTA ATGCACCTAA TAGATCAGGT
GGAGCTATCA ACATTCATCC CAGTCAAGTA CAACAATTGG TGCAAGTGCT TAAGAACGAA
GTTCAGTTGG GAAAGAATGC TTCAGATGAA ACTGAAAAGA AGAAACACTA TGCCAAAGCT
GAAGGAATCA GAACCCTTCT TTTGAATTAT CAAGCGCAAC AAAGGGCGAG GTCACAACAA
CAGCAAAATC AACAAAATCA AAATCAAAAT CAAAATCAAA GCCAACAAAA TCAGATCCAT
GTCCAAACCC AAAATCAACA GAACCAAATG CAACCGGCCC AACAACAAGT AAGGCAGCTA
ACAGCTCAAC AACAATTGCA ACAGCAACAG CAACAGCAGC AAGCTCATCA ACAGCAGATT
CAGGCCGTCC AGGCTCAGGC TCAGGCTCTA GCTGCTGCCC AGATGCTGAA TCCGTTGATG
CAACAGAGTA GCCAATCGCC AATGGCTATG AACTTATCTC AACAGAGCAG ACAACCTTCA
AGCCAGCCTA CGCCCGTTTT GCAGTCTCCA CAGTTGAGTC AACAACAGCA ACAACAAATA
AGACAATCGC CAATGATGCA ACAGAAACCA ACTCCCCAGA TGCGGCAGTC TCCTATTGTA
GCACATCTGC TGCCTCCAGG TTCTCAGCAG ATGAGATCTG GCTCTGCGGG ATCGCAAGGC
TCTCCAGCTC CCATTGCAGG TACTCCATCA ATTCCAGCCA ATATGGCTAC TGTAGAACGA
TTCAATATTG TCAAGCAGAA GTTAACTGAA GTTCAGCATA GAATCCAATT CCTTGAGCAG
AGTAAAAAAG GAAGTAATAT TGGGCCTGAT GAACTTGCAA CTATCGACAA AGAGCTTCTT
GAGCAGAAGA CAAAGTTCCT GCAATTCCAG AAACTCGGTC TTTTCATTAG AAATCTGTTG
ACTCAACAGG CTCAGGCTAG AGCCAATACA CCACAAGCAG CAACAGGGAC CCCTCCGCAA
TTTCAACCAC AACAGCAACA GCAGCAGATG CAACAGCAGC AGCAGTTCAT AAACAAACAG
AACCAACAAG CGATTTCATC TCCAGCTTTG CAAAAGAATC AGCTCACTGT ACAACAGCAA
CAACAATTGC AACAGCAGAT CCAACAAAGA TCGCAGCAAC AGACTCTCTT ACAACAGAGA
GTGCAACAGC AACAGACTAC AATACAGCAG CAACAACAAA TGCATCAACA GCAACAGATG
CAACAGCAGC AGCAACAGCA AAAGCAGCTG ATTCAACAGC AACAACAGAT GCAACAAATC
AAGCGCGCAC AAGCATCTTC TCCACAGTTG CAACAGCAGC CTCAACGGGT GCCTAGTAGA
CAAGCAACAG CAACTCCTCA ACAACATCCC TCTGTTGCCA GTAGACCTGC GTCAATTACT
TCAGCCGGTC AAGCTCAGAA GCCTACTGGC AGTAGACCTC CTTCTACGGC ACACAGCCAA
TCTACGCCTA GTTTCAGTGG TATACCCAAT GCGACTAACG TTGTAGAATC CGCTAATTCT
GGAGCTGCTA ATGCATCTGC TTCAGCGGTT GTTGCTGCTG CTGTTGCTGG TAGTAGCGCA
GGCGCTAAAT CAGTGTCGCC AGCTCCTGCT ACTGGAGACA AGTCGTCACC CAAATCGACA
ACTCCTCAGA AGCTGCAGTC ATTGAGAACT CCTGGTCCTC CTCCGATCAA TTTAGCAGGA
ATCACCAAAC CTCAGGTACC ATCGATTCCA ATCTCTGCAA CAATCAACGT CAAGCCTCCT
ACGGCTGTGA CCTTGAAGGC AACAGGTGAT AGTAGACCTA CGTTGACTGG AGGTGAAGCA
AATAGTTTGA GTATTCTCTT GAATACCCCA GCTATCACCA AATTGCCTAC TTTTGAGTTG
TCTTCTGGAG GAACCAATGG TAGTTTACCT GAAACAGGGC AGAGAGCCTT GACCAAACGG
AAACTCTCGG AGTTAATCAG CACTATGGGC GTGGATGAAG GCGATGGTAA AACTAACATA
GACGGCAATG TCGAAGAGCT CTTGTTGGAT TTAGCCGATG AGTTCATCAA CTCGGTGACT
TCCTTCTCCT GTAGACTAGC CAAACATAGA AAGGTGGATT CCATAGATAC CAAGGACGTG
CAATTACATT TGGAAAGAAA CTGGAACATC AAGATTCCTG GCTATGCTAT GGACGAAATT
AGATCGACTA GAAAGTTGCA GCCTTCTACA AGCTACAACC AGAAGGTTCA AGGTGTCGAG
ATCTCCAGAT CGGTCAATGG TGATATCAAC GGGTAAGAAT TTTTCTCTGT GTAACTATTT
AACTGGGTAT AGTAATGTAC TAGAATTTAA CAT
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| Protein sequence | MSGLPGSSGQ RNPNAPNRSG GAINIHPSQV QQLVQVLKNE VQLGKNASDE TEKKKHYAKA
EGIRTLLLNY QAQQRARSQQ QQNQQNQNQN QNQSQQNQIH SSQSPMAMNL SQQSRQPSSQ
PTPVLQSPQL SSQQMRSGSA GSQGSPAPIA GTPSIPANMA TVERFNIVKQ KLTEVQHRIQ
FLEQSKKGSN IGPDELATID KELLEQKTKF SQFQKLGLFI RNSLTQQAQA RANTPQAATG
TPPQFQPQQQ QQQMQQQQQP ASITSAGQAQ KPTGSRPPST AHSQSTPSFS AKSVSPAPAT
GDKSSPKSTT PQKSQSLRTP GPPPINLAGI TKPQVPSIPI SATINVKPPT AVTLKATGDS
RPTLTGGEAN SLSILLNTPA ITKLPTFELS SGGTNGSLPE TGQRALTKRK LSELISTMGV
DEGDGKTNID GNVEELLLDL ADEFINSVTS FSCRLAKHRK VDSIDTKDVQ LHLERNWNIK
IPGYAMDEIR STRKLQPSTS YNQKVQGVEI SRSVNGDING
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