Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_91430 |
Symbol | |
ID | 4841074 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 761610 |
End bp | 762829 |
Gene Length | 1220 bp |
Protein Length | 384 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640392389 |
Product | predicted protein |
Protein accession | XP_001386737 |
Protein GI | 150866960 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.195484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.260452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCTC AAGCTCTTTA TGACTGGTCA CTTGCAGCTG AATCCGACAA TTGGGTGCTA AACCTCGAGT ATTATGCTCA TAACCAACTG TTCATCTCAT CATCCAGTAA CGGCTCACTT CATGGGTTTC TGGTTGCTAG TCTCAGCAGT TCGCCATATT TCTCGATTCC GAATGCTCAT GAATCGAGTA TAAACAGTAT AAAAAAAATA GACGACTTCA CGTTAGCCTC TTGCTCTACC GACGGTGTGA AGATATGGGA CCTTAGAGCT GGTTCTACTC CAGTTCACAC CCTTACCAAC ACCAAGAACT CCAACTTCCT CAGTTTGGGG TATGGTCACA ACCTCTTGGC AGGTGGGACA GAGTTGGTGG GTGTCGATGC CGAATTGCAT ATTTGGGATT TGAGAAATCC AACTGAAGTC GTCAGATCGT TTGTGGACTC ACACCATGAC GATATTACAT GTATCGAATT CCATCCTACC ATTTCTAATT ACTTGATGTC TGGCTCAACA GATGGATACG TCAACATATA CGATCTCAAC GAAAAAGATG AGGACGATGC CTTGCACCAA GTGATTAACT TTGCCTCGGT TCATTCGTGC CATTTCACGG GTCCAAAACG AATTTCTATA CTTTCTCATA TGGAAACTTT AGCTTTCTAC GAATTGAATG ACACCAATTA TGAAGTTATT GCTGAACCAG AGCCAAATGA TCTTGGTGAT GTGAGATCAA AATGGCCTGA TTGTGAGTAT ATCGTAGATC TCAACACTCA AGGATATGTT GGCGTGGGTG CAAATTCGCA GAGAAAATTC TCTCTTTTTC CATTTGATAT TGCCCACGAG AAAATCGACC TTTCCCGACC TACATGGTTT GCTGATGCAC ATGGAGAAGA GATTGTTCGT GACTTAGTTG TGATACCAAA TACAAGAAAT GCATTGACTT GCGGAGAGGA CGGTCACATC AGATTATGGG AGATGCCCTA TGAGTTAGAA ATAGCATCCA ATTCTCCACA AGTAGCAGAA GAAGGTACAC AAGACATAGA GGTGGACTCT GATCTGGATA GTACAAAGAA AGAGAAGAAA GAAAAACATA AAAAACACAA GAAGGAAAAG AAGGAAAAGA AAGATAAAGA AAAGAAAGAA AAGAAAGAAA AGAAAGACAA GAAAGACAAA AAGGACAAGA AGAAAAAGAA GAGCGACGTC AGGTTCAAAC CCTATTAAGC
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Protein sequence | MRAQALYDWS LAAESDNWVL NLEYYAHNQS FISSSSNGSL HGFSVASLSS SPYFSIPNAH ESSINSIKKI DDFTLASCST DGVKIWDLRA GSTPVHTLTN TKNSNFLSLG YGHNLLAGGT ELVGVDAELH IWDLRNPTEV VRSFVDSHHD DITCIEFHPT ISNYLMSGST DGYVNIYDLN EKDEDDALHQ VINFASVHSC HFTGPKRISI LSHMETLAFY ELNDTNYEVI AEPEPNDLGD VRSKWPDCEY IVDLNTQGYV GVGANSQRKF SLFPFDIAHE KIDLSRPTWF ADAHGEEIVR DLVVIPNTRN ALTCGEDGHI RLWEMPYELE IASNSPQVAE EGTQDIEVDS DSDNKEKKEK KEKKDKKDKK DKKKKKSDVR FKPY
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