Gene PICST_91430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_91430 
Symbol 
ID4841074 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp761610 
End bp762829 
Gene Length1220 bp 
Protein Length384 aa 
Translation table12 
GC content41% 
IMG OID640392389 
Productpredicted protein 
Protein accessionXP_001386737 
Protein GI150866960 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.195484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.260452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCTC AAGCTCTTTA TGACTGGTCA CTTGCAGCTG AATCCGACAA TTGGGTGCTA 
AACCTCGAGT ATTATGCTCA TAACCAACTG TTCATCTCAT CATCCAGTAA CGGCTCACTT
CATGGGTTTC TGGTTGCTAG TCTCAGCAGT TCGCCATATT TCTCGATTCC GAATGCTCAT
GAATCGAGTA TAAACAGTAT AAAAAAAATA GACGACTTCA CGTTAGCCTC TTGCTCTACC
GACGGTGTGA AGATATGGGA CCTTAGAGCT GGTTCTACTC CAGTTCACAC CCTTACCAAC
ACCAAGAACT CCAACTTCCT CAGTTTGGGG TATGGTCACA ACCTCTTGGC AGGTGGGACA
GAGTTGGTGG GTGTCGATGC CGAATTGCAT ATTTGGGATT TGAGAAATCC AACTGAAGTC
GTCAGATCGT TTGTGGACTC ACACCATGAC GATATTACAT GTATCGAATT CCATCCTACC
ATTTCTAATT ACTTGATGTC TGGCTCAACA GATGGATACG TCAACATATA CGATCTCAAC
GAAAAAGATG AGGACGATGC CTTGCACCAA GTGATTAACT TTGCCTCGGT TCATTCGTGC
CATTTCACGG GTCCAAAACG AATTTCTATA CTTTCTCATA TGGAAACTTT AGCTTTCTAC
GAATTGAATG ACACCAATTA TGAAGTTATT GCTGAACCAG AGCCAAATGA TCTTGGTGAT
GTGAGATCAA AATGGCCTGA TTGTGAGTAT ATCGTAGATC TCAACACTCA AGGATATGTT
GGCGTGGGTG CAAATTCGCA GAGAAAATTC TCTCTTTTTC CATTTGATAT TGCCCACGAG
AAAATCGACC TTTCCCGACC TACATGGTTT GCTGATGCAC ATGGAGAAGA GATTGTTCGT
GACTTAGTTG TGATACCAAA TACAAGAAAT GCATTGACTT GCGGAGAGGA CGGTCACATC
AGATTATGGG AGATGCCCTA TGAGTTAGAA ATAGCATCCA ATTCTCCACA AGTAGCAGAA
GAAGGTACAC AAGACATAGA GGTGGACTCT GATCTGGATA GTACAAAGAA AGAGAAGAAA
GAAAAACATA AAAAACACAA GAAGGAAAAG AAGGAAAAGA AAGATAAAGA AAAGAAAGAA
AAGAAAGAAA AGAAAGACAA GAAAGACAAA AAGGACAAGA AGAAAAAGAA GAGCGACGTC
AGGTTCAAAC CCTATTAAGC
 
Protein sequence
MRAQALYDWS LAAESDNWVL NLEYYAHNQS FISSSSNGSL HGFSVASLSS SPYFSIPNAH 
ESSINSIKKI DDFTLASCST DGVKIWDLRA GSTPVHTLTN TKNSNFLSLG YGHNLLAGGT
ELVGVDAELH IWDLRNPTEV VRSFVDSHHD DITCIEFHPT ISNYLMSGST DGYVNIYDLN
EKDEDDALHQ VINFASVHSC HFTGPKRISI LSHMETLAFY ELNDTNYEVI AEPEPNDLGD
VRSKWPDCEY IVDLNTQGYV GVGANSQRKF SLFPFDIAHE KIDLSRPTWF ADAHGEEIVR
DLVVIPNTRN ALTCGEDGHI RLWEMPYELE IASNSPQVAE EGTQDIEVDS DSDNKEKKEK
KEKKDKKDKK DKKKKKSDVR FKPY