| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_91253 |
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| Symbol | RGT2 |
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| ID | 4840859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 893990 |
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| End bp | 895662 |
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| Gene Length | 1673 bp |
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| Protein Length | 528 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640392174 |
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| Product | glucose transporter/sensor |
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| Protein accession | XP_001386588 |
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| Protein GI | 126140132 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACAAAAATGG GTTTAGAAGA CAGTGCTCTC TTGCAAAAGT ACATCAACTT CGGTGAAAAG
AAGGCTGGTT CCACCACCAT GGGTATCTGT GTTGGTTTGT TCGCAGCCTT CGGTGGTATC
CTTTTCGGTT ATGACACTGG TACCATCTCC GGTATCATGG CCATGGACTA CGTCACTGCC
AGATTCCCAT CCAACCACCA ATCTTTCAGT TCTTCTGAAT CTTCCCTTAT TGTTTCCATT
TTGTCTGTTG GTACCTTCTT TGGTTCTCTT TCTGCATCTT TCATCTCCGA CAGATTGGGT
CGTAGATTGA CTTTAATGAT CTCCACCTTG ATCATCTTCA ATGTCGGTAT TATCTTGCAA
ACTGCCTCTA CTAGCATTCC ACTTTTGTGT GTTGGTAGAG TTCTTGCTGG TCTTGGTGTT
GGTCTCATTT CCGCTGTTAT TCCATTGTAC CAAGCTGAAA CAGTTCCAAA GTGGATCAGA
GGTGCTGTTG TCTCCTGTTA CCAATGGGCC ATTACCCTTG GTTTGTTGTT GGCTGCTGTT
GTTAACCAAG GTACCCACAA CAGAAATGAC TCTGGTTCCT ACAGAATCCC AATTGCTATC
CAATTCTTGT GGGCTTTGAT TTTGGGAGGT GGTATGTGTT TGTTGCCAGA AACCCCAAGA
TTCTGGGTTT CTAAAGGTGA CAACGACAGA GCCAAGGACT CCTTGAGAAG ATTGAGAAAG
TTGCCCCTCG ACCATCCCGA CTTGATTGAA GAATACGAAG AAATCAAGGC TAACTACGAA
TACGAAGCTC AATACGGTTC AGGTTCTTGG AGTCAAGTTT TTGCTAACAA GAACCACCAA
AGAAAGAGAT TGGCCATGGG TGTTGGTATC CAAGCCTTGC AACAATTGAC CGGTATTAAC
TTTATCTTCT ACTATGGTAC TAACTTCTTC AAGGGTTCTG GTATCAAAAA CGAATTCCTT
ATCCAAATGG CCACTAACAT TGTCAACTTC GGTTCTACTG TCCCAGGTAT TCTTTTGGTT
GAAATTATTG GTAGAAGAAA GTTGTTGTTG GGTGGTTCTG CAGTTATGTC CATTTCTCAA
TTGATTGTTG CTATTGTCGG TGTTGCCGCT GGTGAAGGTT CAACTTCTGC CAACAAGTGT
TTGGTTGCCT TCGTTTGTAT CTTCATTGCT GCTTTCGCAG CCACTTGGGG TCCTCTTTGT
TGGGCTGTCA TTGCCGAATG TTACCCACTT ACAGTTAGAC AAAAGTCCAT CTCCTTGTGT
ACAGCTTCCA ACTGGTTGTG GAACTGGGGT ATTGCCTACG CTACTCCTTA CATGGTCAAC
TCCGGTCCAG GTAACGCCAA CTTGGGTTCC AAGGTTTTCT TCATCTGGGG TGGTTGTAAT
ATCATTGGTG GTCTTTTCGT GTGGTACCTT GTCTACGAAA CTAAGGGCTT GACCTTAGAA
CAAATCGATG AAATGTACGA AAAGGTTCCA AAGGCTTGGC AATCTACCAG ATTCATTCCA
TCCGAACATG CATTCACTCA ACCATCCGCA GCTGCCTCTG TCTCTTCTGG TAAGGCTGAA
GGTGTTTCTG AAGTTGAAGA AGCTTCTGTA TAGATACCTC ATGCACATTA ATCGACTTAC
GTCTTTATGA ATTTTACTTT CTCCTAATAT AATATTATGG CCAATTAACG TTG
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| Protein sequence | MGLEDSALLQ KYINFGEKKA GSTTMGICVG LFAAFGGILF GYDTGTISGI MAMDYVTARF
PSNHQSFSSS ESSLIVSILS VGTFFGSLSA SFISDRLGRR LTLMISTLII FNVGIILQTA
STSIPLLCVG RVLAGLGVGL ISAVIPLYQA ETVPKWIRGA VVSCYQWAIT LGLLLAAVVN
QGTHNRNDSG SYRIPIAIQF LWALILGGGM CLLPETPRFW VSKGDNDRAK DSLRRLRKLP
LDHPDLIEEY EEIKANYEYE AQYGSGSWSQ VFANKNHQRK RLAMGVGIQA LQQLTGINFI
FYYGTNFFKG SGIKNEFLIQ MATNIVNFGS TVPGILLVEI IGRRKLLLGG SAVMSISQLI
VAIVGVAAGE GSTSANKCLV AFVCIFIAAF AATWGPLCWA VIAECYPLTV RQKSISLCTA
SNWLWNWGIA YATPYMVNSG PGNANLGSKV FFIWGGCNII GGLFVWYLVY ETKGLTLEQI
DEMYEKVPKA WQSTRFIPSE HAFTQPSAAA SVSSGKAEGV SEVEEASV
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