Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85794 |
Symbol | TDH2 |
ID | 4841060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 352691 |
End bp | 353819 |
Gene Length | 1129 bp |
Protein Length | 333 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640392375 |
Product | Glyceraldehyde-3-phosphate dehydrogenase |
Protein accession | XP_001386460 |
Protein GI | 126139876 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.210966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.603982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATTCACATAA TATAGTAGTA TAAATAAAAA TTTCAAGATG GTTACAATTG GTATTAATGG TTTTGGACGT ATCGGAAGAT TGGTGTTAAG AATCGCTTTG GAAAGACCAG ACATTGATGT CGTCGCTGTT AATGATCCCT TCATTGCTCC CGACTATGCA GCCTACATGT TCAAGTACGA TTCTACCCAT GGCAGATACA AGGGCACAGT CGAATCTGAT GCTGAAAACA TCATTATCAA CGGGAAGAAG ATCAGAGCAT TTCAAGAGAG AGACCCAGCT AACATCCCTT GGGGAAAGGT AGGTGTCGAC TATGTTGTTG AGTCTACAGG TATCTTCAAG AAGTTGGCTG GCGCACAAAA GCACATAGAC GCTGGTGCTA AGAAAGTTAT TATCACTGCT CCTTCTCCAG ATGCCCCAAT GTTCGTTGTT GGTGTTAATG AAGATAAGTA CACTCCTGAC TTGAACATCA TCTCCAACGC CTCGTGTACT ACCAACTGTT TGGCTCCATT GGCAAAGGTT ATTAATGACA ACTTTGGAAT TGAAGAAGGC TTGATGACTA CTGTTCACTC TATCACTGCT ACTCAAAAGA CAGTCGACGG CCCATCTCAA AAGGACTGGA GAGGAGGAAG AACCGCTTCT GGTAACATTA TTCCTTCTTC TACTGGTGCT GCCAAGGCTG TCGGAAAGGT GATTCCACAG TTGAATGGTA AGTTAACTGG TATGGCTTTG AGAGTCCCAA CCGTGGATGT TTCTGTAGTC GACTTGACAG TGAAATTGGC TAGACCAGTT ACCTACGAGG AAATCTGTGC TGCTATGAAG AAAGTCTCAG AAGGTGCCTT GAAGGGCGTC ATTGGGTACA CCGAAGAAGC CGTCGTTTCT AGTGATTTCG TCACTTCCAC CTACTCGTGT GTGTTCGATG CCAAGGCTGG TATTTTGCTT TCTCCTCAAT TCGTCAAGTT GATTGCCTGG TATGATAACG AGTACGGTTA CTCAGTTAGA GTTGTCGACT TGTTGGAAAA GGTTGCGGCA ACTAAATAGT TGTAGTATTT GTTATTTCAT ATATATGTCT CTCATTATGA ACTTCTTTTA TTGAATACGA TGTTAATGAC ATTAGTTTTT TAGGCGGTG
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Protein sequence | MVTIGINGFG RIGRLVLRIA LERPDIDVVA VNDPFIAPDY AAYMFKYDST HGRYKGTVES DAENIIINGK KIRAFQERDP ANIPWGKVGV DYVVESTGIF KKLAGAQKHI DAGAKKVIIT APSPDAPMFV VGVNEDKYTP DLNIISNASC TTNCLAPLAK VINDNFGIEE GLMTTVHSIT ATQKTVDGPS QKDWRGGRTA SGNIIPSSTG AAKAVGKVIP QLNGKLTGMA LRVPTVDVSV VDLTVKLARP VTYEEICAAM KKVSEGALKG VIGYTEEAVV SSDFVTSTYS CVFDAKAGIL LSPQFVKLIA WYDNEYGYSV RVVDLLEKVA ATK
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