| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85794 |
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| Symbol | TDH2 |
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| ID | 4841060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 352691 |
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| End bp | 353819 |
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| Gene Length | 1129 bp |
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| Protein Length | 333 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392375 |
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| Product | Glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | XP_001386460 |
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| Protein GI | 126139876 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.210966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.603982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATTCACATAA TATAGTAGTA TAAATAAAAA TTTCAAGATG GTTACAATTG GTATTAATGG
TTTTGGACGT ATCGGAAGAT TGGTGTTAAG AATCGCTTTG GAAAGACCAG ACATTGATGT
CGTCGCTGTT AATGATCCCT TCATTGCTCC CGACTATGCA GCCTACATGT TCAAGTACGA
TTCTACCCAT GGCAGATACA AGGGCACAGT CGAATCTGAT GCTGAAAACA TCATTATCAA
CGGGAAGAAG ATCAGAGCAT TTCAAGAGAG AGACCCAGCT AACATCCCTT GGGGAAAGGT
AGGTGTCGAC TATGTTGTTG AGTCTACAGG TATCTTCAAG AAGTTGGCTG GCGCACAAAA
GCACATAGAC GCTGGTGCTA AGAAAGTTAT TATCACTGCT CCTTCTCCAG ATGCCCCAAT
GTTCGTTGTT GGTGTTAATG AAGATAAGTA CACTCCTGAC TTGAACATCA TCTCCAACGC
CTCGTGTACT ACCAACTGTT TGGCTCCATT GGCAAAGGTT ATTAATGACA ACTTTGGAAT
TGAAGAAGGC TTGATGACTA CTGTTCACTC TATCACTGCT ACTCAAAAGA CAGTCGACGG
CCCATCTCAA AAGGACTGGA GAGGAGGAAG AACCGCTTCT GGTAACATTA TTCCTTCTTC
TACTGGTGCT GCCAAGGCTG TCGGAAAGGT GATTCCACAG TTGAATGGTA AGTTAACTGG
TATGGCTTTG AGAGTCCCAA CCGTGGATGT TTCTGTAGTC GACTTGACAG TGAAATTGGC
TAGACCAGTT ACCTACGAGG AAATCTGTGC TGCTATGAAG AAAGTCTCAG AAGGTGCCTT
GAAGGGCGTC ATTGGGTACA CCGAAGAAGC CGTCGTTTCT AGTGATTTCG TCACTTCCAC
CTACTCGTGT GTGTTCGATG CCAAGGCTGG TATTTTGCTT TCTCCTCAAT TCGTCAAGTT
GATTGCCTGG TATGATAACG AGTACGGTTA CTCAGTTAGA GTTGTCGACT TGTTGGAAAA
GGTTGCGGCA ACTAAATAGT TGTAGTATTT GTTATTTCAT ATATATGTCT CTCATTATGA
ACTTCTTTTA TTGAATACGA TGTTAATGAC ATTAGTTTTT TAGGCGGTG
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| Protein sequence | MVTIGINGFG RIGRLVLRIA LERPDIDVVA VNDPFIAPDY AAYMFKYDST HGRYKGTVES
DAENIIINGK KIRAFQERDP ANIPWGKVGV DYVVESTGIF KKLAGAQKHI DAGAKKVIIT
APSPDAPMFV VGVNEDKYTP DLNIISNASC TTNCLAPLAK VINDNFGIEE GLMTTVHSIT
ATQKTVDGPS QKDWRGGRTA SGNIIPSSTG AAKAVGKVIP QLNGKLTGMA LRVPTVDVSV
VDLTVKLARP VTYEEICAAM KKVSEGALKG VIGYTEEAVV SSDFVTSTYS CVFDAKAGIL
LSPQFVKLIA WYDNEYGYSV RVVDLLEKVA ATK
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