Gene PICST_85793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85793 
Symbol 
ID4841057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp335060 
End bp335592 
Gene Length533 bp 
Protein Length131 aa 
Translation table12 
GC content40% 
IMG OID640392372 
Productpredicted protein 
Protein accessionXP_001386457 
Protein GI126139870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.47393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAAACACTAG AACAAAATGG CCCCACCAAA AGCTGAAAAG AAACCCGCTT CGAAAGCCCC 
AGCTGAAAAG AAGCCTGCTG CTAAGAAGAC TGCTTCTGCT ACTGACTCTA AGAAGAGAAC
TAAGACTAGA AAAGAAACCT ACTCTTCTTA CATCTACAAG GTCTTGAAAC AAACTCACCC
AGACACTGGA ATCTCTCAAA AGGCTATGTC TATCATGAAC TCTTTTGTGA ATGATATCTT
TGAAAGAATC GCTTCTGAAG CTTCCAAGTT GGCAGCCTAT AACAAGAAGT CTACCATTTC
TGCCAGAGAA ATTCAAACTG CTGTCAGATT GATCTTGCCA GGTGAATTGG CCAAGCATGC
AGTTTCTGAA GGTACTAGAG CTGTTACCAA GTACTCTTCC GCTTCTAACT AGGAGTAGAC
GTTTCTTATT CTGGTGTCAT AAAGTTTAAT TCTTGCTGCC CCTTTCCGTT AACTTTCCCC
AACTGTATTA GTTTTAATTA GTTCTTAGTA TTATTATATT ATGATCGAGG AGG
 
Protein sequence
MAPPKAEKKP ASKAPAEKKP AAKKTASATD SKKRTKTRKE TYSSYIYKVL KQTHPDTGIS 
QKAMSIMNSF VNDIFERIAS EASKLAAYNK KSTISAREIQ TAVRLILPGE LAKHAVSEGT
RAVTKYSSAS N