Gene PICST_85790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85790 
SymbolMCM2 
ID4840897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp632221 
End bp634903 
Gene Length2683 bp 
Protein Length859 aa 
Translation table12 
GC content44% 
IMG OID640392212 
ProductDNA replication licensing factor, MCM2 component (Minichromosome maintenance protein 2) 
Protein accessionXP_001386523 
Protein GI150866803 
COG category[L] Replication, recombination and repair 
COG ID[COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.494406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGTTTAGTTT ATATTTTGAA ACTAGCAACT AAACACGATG TCGAGTCCTC CATCCGCTAG 
CCGAGGCTCC AGAAAGAGAC AGGCAGAAGA CGAAGATGAG CGTTCGTCTA CTCATCAGCC
CTCATCACCC TTGGGCTCCA GTCCACAATT GCCACCTTCT TCGCCTGCTA TTCCTTTCGA
TATGGCCGCT GAAGAAGAAG ACGAAATTCA CAATGACGTT GCTGACTTGA ATCCTTCCGA
CGAAGAGGAA GGTGAAGACT TGATGGAAGG CATGGAACGT GACTACCGTT CCCGGGCCGA
ACAGGACCAC TACAACATGT CTGATATCGA CGACGACGAG TACGAGGCTA TGGATGCCGC
CACCAGAAGA CGAATCGACG AACAAATGAA CCGTCGTGAT CAGCTTTTGA ACAATACCCA
TTCTCGTCAA CAGGCTTTCT TAGAAGACGA CGAAGACAAC GAAATGGACC AGGAGTTGGA
TATGCTCGGT TTGCCCATCC AGAGAAGAAG AAGAAGACAA TATGACAACG ACGCTGACGA
AATGCTTGAC GATGTTGAAA TCGATCCTTT TAACGAAGAA TTGTCTCTAG AGAGTTTGAC
AGATATAAAG GCTCCCAGTA TCACCGAATG GATTCTTCAG CCAGCCGTAT CACGTTCCAT
TGCCCGTGAA TTCAAGTCGT TTTTGCTTGA ATACACCGAC GATAAAGGTA GATCGGTTTA
CGGTGCCCGG ATCAGAACGT TGGGTGAAGT CAATGCCGAA TCGTTGGATG TCACATACGA
GCACTTGGCT GATTCCAAGG CTATCTTGGC TCTCTTCTTG GCCACATCCC CTTCAGAGAT
GCTCAAGATC TTTGATATTG TTTCCATGGA AGCCACGGAA TTGCATTACC CCAACTATTC
GCAGATCCAC CTGGAAATCC ATGTCCGTAT AGTCGGATTT CCTAAGCACA CGAACTTGCG
TGATTTGCGT GAAAACGACT TGAATCAGTT GATTAAAGTT GGTGGTGTAG TCACCAGAAG
AACAGGTGTG TTTCCCCAGT TGAAATATGT CAAGTTCGAC TGTCTCAAGT GCGGAGTTGT
TCTTGGTCCC TTTATCCAAG ATTCAAACAC TGAAGTCAGA ATCTCATTCT GTACAAACTG
TCAGTCCAAG GGTCCGTTCA GAATGAATTC CGAGAAGACG TTGTACAGAA ACTACCAAAG
AATCACTCTT CAAGAATCTC CCGGCACCGT TCCAGCAGGT AGATTACCTA GACACCGTGA
AGTTATCTTG TTGAGTGACT TAGTGGATGT AGCTAAGCCA GGTGAAGAAA TCGAAGTAAC
GGGTATCTAC AAGAATAACT ATGATGGAAA CTTGAATGCC AAAAACGGGT TCCCAGTGTT
TGCTACAATA ATCGAAGCTA ACTCTATCCG TCGTAAGGAA AGCAGCTACA GCGAAAACTC
TTTGAGCTCA TGGTCAGAAG AAGAGGAACT GCTGTTCAGA AGATTGTCTC AAGAAAAGGG
AATAATCGAC AAAATTATTT CTTCTATGGC TCCTTCTATT TACGGGCACA AGGATATCAA
GACTGCTATA GCCTGTTCTT TGTTTGGTGG TGTTCCCAAG GATGTCAACG GTAAGCATTC
TATCAGAGGT GATATTAACG TGTTGTTACT AGGAGATCCT GGTACTGCCA AATCTCAGAT
CTTGAAGTAC GCTGAAAAGA CGGCCAATCG TGCTGTGTTT GCTACCGGCC AAGGTGCTTC
CGCTGTTGGT TTGACAGCTT CTGTGAGAAA AGATCCTATT ACAAGAGAGT GGACTTTAGA
AGGTGGTGCA CTTGTTCTTG CTGACAAAGG TACCTGTTTA ATTGATGAGT TCGATAAGAT
GAATGACCAA GATCGTACCT CTATTCACGA AGCCATGGAA CAACAGTCGA TTTCTGTTTC
CAAGGCTGGT ATTGTCACTA CCTTACAAGC CCGTTGTGCC ATCATTGCCG CAGCCAATCC
TAATGGTGGA CGATACAATT CTACGTTGCC ATTGTCTCAG AACGTTGATT TGACTGAGCC
TATCTTATCG AGATTTGATA TCTTGTGTGT TGTAAGAGAT TTAGTCAACC CTGAGCTGGA
CGAAAGACTT GCTAGTTTCG TCATTGATTC GCATATGAGA TCACACCCTA CCAATACAGA
AGATATAGAA GACGATGAAG CTGAAACTGG AGAAGAAGGC GACGGTGTAA GAAGAACTAG
AAGAGAAAAG ATATCACAGC TTAACAAGCA GAAGGAAAGT GAAATCTCGC CAATTTCCCA
AGAATTGCTT ATGAAATACA TCAACTACGC TCGTGTAAAG GTGCAACCAA AGTTACATCA
GATGGATATG GACAAGGTTG CTAGAGTGTA TGCTGAGTTG AGAAAGGAGT CTATTTCTAC
GGGCTCGTTC CCAATCACGG TTCGTCACTT GGAAAGTATC TTGAGAATTG CCGAAGCTTT
TGCCAAGATG AGATTGAGTG ACTTTGTAAG TCAGAGTGAT TTGAACCGTG CCATTAAGGT
CAGTATTGAC AGTTTTGTGG GTGCCCAGAA GGTCACGGTC CGCAAACAGT TGCAATCCAA
GTTCCAGAAA TTTACCTTGC CTACCAGAAG AAGGTAACCA TGGGGCTTTG TTTCTTGTAT
GTATTATTTA GAGAGTTAGT TATAATAGGA TGTACTTTAG CTG
 
Protein sequence
MSSPPSASRG SRKRQAEDED ERSSTHQPSS PLGSSPQLPP SSPAIPFDMA AEEEDEIHND 
VADLNPSDEE EGEDLMEGME RDYRSRAEQD HYNMSDIDDD EYEAMDAATR RRIDEQMNRR
DQLLNNTHSR QQAFLEDDED NEMDQELDML GLPIQRRRRR QYDNDADEML DDVEIDPFNE
ELSLESLTDI KAPSITEWIL QPAVSRSIAR EFKSFLLEYT DDKGRSVYGA RIRTLGEVNA
ESLDVTYEHL ADSKAILALF LATSPSEMLK IFDIVSMEAT ELHYPNYSQI HSEIHVRIVG
FPKHTNLRDL RENDLNQLIK VGGVVTRRTG VFPQLKYVKF DCLKCGVVLG PFIQDSNTEV
RISFCTNCQS KGPFRMNSEK TLYRNYQRIT LQESPGTVPA GRLPRHREVI LLSDLVDVAK
PGEEIEVTGI YKNNYDGNLN AKNGFPVFAT IIEANSIRRK ESSYSENSLS SWSEEEESSF
RRLSQEKGII DKIISSMAPS IYGHKDIKTA IACSLFGGVP KDVNGKHSIR GDINVLLLGD
PGTAKSQILK YAEKTANRAV FATGQGASAV GLTASVRKDP ITREWTLEGG ALVLADKGTC
LIDEFDKMND QDRTSIHEAM EQQSISVSKA GIVTTLQARC AIIAAANPNG GRYNSTLPLS
QNVDLTEPIL SRFDILCVVR DLVNPESDER LASFVIDSHM RSHPTNTEDI EDDEAETGEE
GDGVRRTRRE KISQLNKQKE SEISPISQEL LMKYINYARV KVQPKLHQMD MDKVARVYAE
LRKESISTGS FPITVRHLES ILRIAEAFAK MRLSDFVSQS DLNRAIKVSI DSFVGAQKVT
VRKQLQSKFQ KFTLPTRRR