| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85750 |
|---|
| Symbol | RPL15A |
|---|
| ID | 4840917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | + |
|---|
| Start bp | 581724 |
|---|
| End bp | 582488 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640392232 |
|---|
| Product | 60S ribosomal protein L15-B (YL10) (L13) (RP15R) (YP18) |
|---|
| Protein accession | XP_001386507 |
|---|
| Protein GI | 126139970 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1632] Ribosomal protein L15E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.162573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TATCATTAAG TTAAATCAAA ATGGGTGCCT ACAAGTATTT GGAAGAATTG CAAAGAAAGA
AGCAATCTGA TGTTATGCGT TTCTTGCATC GTGTCAGATG TTGGGAATAC AGAAACAAGA
CTGTTATCCA CAGAGCTTCT AGACCATCTA GACCAGACAA GGCCAGAAGA TTGGGATACA
AGGCCAAGCA AGGTTTCGTC ATCTTCAGAG TCAGAGTCAG AAGAGGTGGC AGAAAGAGAC
CTGTGCCAAA GGGTGCTACT TATGGTAAGC CAACCAACCA GGGTGTTAAC CAATTGAAGT
ACCAAAGATC CTTGAGATCT ACCGCTGAAG AAAGAGTTGG TAGACGTGCT TCTAACTTGA
GAGTCTTGAA CTCCTACTGG GTTAACCAGG ACTCCACCTA CAAGTACTTC GAAGTCATCT
TGGTCGACCC ATCTCACAAG GCCATCAGAA GAGACGCCAG ATACAACTGG ATCGTCAACC
CTGTCCACAA GAGAAGAGAA GCCAGAGGTC TTACTTCCAC CGGAAAGAAG TCCAGAGGTA
TCAACAAGGG TCACTTGTTC CACAACACCC AAGCTGGTCG TCGTCACACC TGGAAGAGAC
AAAACACTTT GTCTTTGTGG AGATACAGAT CTTAAGCGTG ATGTATTGTT TAATTTTTCG
GATTTTTACA ATGCTACACG TGATCTGGCT TTCCTTGTGT TGAAGGGGTT GCTTGTAAGT
ATTTACTGTT TATAGTGCAA TTTTGATATA CAAAAGCTGG TGTAC
|
|---|
| Protein sequence | MGAYKYLEEL QRKKQSDVMR FLHRVRCWEY RNKTVIHRAS RPSRPDKARR LGYKAKQGFV
IFRVRVRRGG RKRPVPKGAT YGKPTNQGVN QLKYQRSLRS TAEERVGRRA SNLRVLNSYW
VNQDSTYKYF EVILVDPSHK AIRRDARYNW IVNPVHKRRE ARGLTSTGKK SRGINKGHLF
HNTQAGRRHT WKRQNTLSLW RYRS
|
|---|
| |